Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO010963 has 18 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 18 records out of 18 total, starting on record 1, ending on 18

gene_id species description comment strand chr outlier
AL8G07120 aly name=fgenesh2_kg.8__499__AT5G43210.1;pid=494683;prot=eq;tid=494683 - scaffold_8 No
AT5G43210 ath Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); BEST Arabidopsis thaliana protein match is: Excinuclease ABC, C subunit, N-terminal (TAIR:AT2G30350.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Excinuclease ABC, C subunit, N-terminal transcript=eq;prot=eq; + 5 No
BD4G26580 bdi 5'-flap endonuclease activity (Blast2GO) pid=Bradi4g26580.1;tid=Bradi4g26580.1;GeneName=Bradi4g26580;transcript=eq;prot=eq - Bd4 No
CP00197G00240 cpa name=evm.TU.supercontig_197.24;pid=evm.TU.supercontig_197.24;prot=eq;transcript=eq + supercontig_197 No
GM09G36020 gma 09 pid=16277349;transcript=eq;prot=eq;name=Glyma09g36020.1 + Gm09 No
LJ0G052600 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_019630;name=LjSGA_019630.0.1 + LjSGA_019630 No
MD00G187300 mdo transcript=eq;prot=eq;pid=MDP0000123923;tid=MDP0000123923;contig=MDC008052.251 + MDC008052.251 No
ME06914G00370 mes PACid=17962558;RNAname=cassava4.1_017490m;GeneName=cassava4.1_017490m.g;transcript=eq;prot=eq - scaffold06914 No
OS11G04935 osa GIY%2DYIG catalytic domain containing protein, putative, expressed transcript=eq;prot=eq; - 11 No
OS12G04934 osa GIY%2DYIG catalytic domain containing protein, putative, expressed transcript=eq;prot=eq; - 12 No
PP00230G00260 ppa NULL name=estExt_fgenesh1_pg.C_2300027,pid=170079,prot=eq,tid=170079 - scaffold_230 No
PT01G25940 ptr PACid=17304951;name=POPTR_0001s26700;alias=pt040400m,fgenesh4_pg.C_LG_I001816; transcript=eq;prot=eq;protein_id=17304951; + scaffold_1 No
PT01G25970 ptr PACid=17330562;name=POPTR_0001s26730;alias=pt041685m; transcript=eq;prot=eq;protein_id=17330562; + scaffold_1 No
PT01G26020 ptr PACid=17314152;name=POPTR_0001s26780;alias=pt040418m,fgenesh4_pm.C_LG_I000739; transcript=eq;prot=eq;protein_id=17314152; + scaffold_1 No
RC29990G00120 rco name=29990.m000509;gene=29990.t000013;note=29990.t000013;transcript=eq;prot=eq + 29990 No
SB08G001060 sbi 8 prot=eq;pid=5059227;tid=5059227 + chr_8 No
VV13G01050 vvi name=GSVIVG01001443001; transcript=eq;prot=eq;name=GSVIVG01001443001;pid=GSVIVG01001443001;tid=GSVIVT01001443001; - chr13 No
ZM10G00260 zma holiday junction resolvase, S1x1p, URI domain nuclease name=GRMZM2G129907;tid=GRMZM2G129907_T01;pid=GRMZM2G129907_P01;transcript=eq;prot=eq; + 10 No
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