Sub-family  

Parent family
HOM000598
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO010871 has 18 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 18 records out of 18 total, starting on record 1, ending on 18

gene_id species description comment strand chr outlier
AL6G22120 aly name=fgenesh1_pg.C_scaffold_6001862;pid=351269;prot=eq;tid=351269 - scaffold_6 No
AT5G22460 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 866 Blast hits to 864 proteins in 211 species: Archae - 4; Bacteria - 450; Metazoa - 1; Fungi - 48; Plants - 314; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 5 No
BD4G42337 bdi pid=Bradi4g42337.1;tid=Bradi4g42337.1;GeneName=Bradi4g42337;transcript=eq;prot=eq - Bd4 No
CP00032G00250 cpa name=evm.TU.supercontig_32.25;pid=evm.TU.supercontig_32.25;prot=eq;transcript=eq - supercontig_32 No
FV2G44160 fve hypothetical protein transcript=eq;prot=eq;pid=gene21809 - LG2 No
GM12G30960 gma 12 pid=16288465;transcript=eq;prot=eq;name=Glyma12g30960.1 + Gm12 No
ME02973G00070 mes PACid=17983839;RNAname=cassava4.1_011224m;GeneName=cassava4.1_011224m.g;transcript=eq;prot=eq + scaffold02973 No
ME02973G00080 mes PACid=17983870;RNAname=cassava4.1_021674m;GeneName=cassava4.1_021674m.g;transcript=eq;prot=eq + scaffold02973 No
MT2G086290 mtr Os03g0116200 protein (Fragment) (AHRD V1 *-*- C7IZX0_ORYSJ); contains Interpro domain(s) IPR000073 Alpha/beta hydrolase fold-1 transcript=eq;prot=eq;pid=Medtr2g086290.1; + 2 No
OS12G05600 osa hydrolase, alpha%2Fbeta fold family protein, putative, expressed transcript=eq;prot=eq; + 12 No
OSINDICA_12G04400 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC032126; + Chr12 No
PT04G20240 ptr PACid=17327734;name=POPTR_0004s21380;alias=pt006786m,grail3.0066013503; transcript=eq;prot=eq;protein_id=17327734; - scaffold_4 No
RC30055G00150 rco name=30055.m001545;gene=30055.t000015;note=30055.t000015;transcript=eq;prot=eq + 30055 No
RC30055G00160 rco name=30055.m001546;gene=30055.t000016;note=30055.t000016;transcript=eq;prot=eq + 30055 No
SB08G003220 sbi 8 prot=eq;pid=5059331;tid=5059331 + chr_8 No
TC09G027960 tca RNAname=Tc09_t027960;GeneName=Tc09_g027960;transcript=eq;prot=eq - Tc09 No
VV06G10200 vvi name=GSVIVG01036139001; transcript=eq;prot=eq;name=GSVIVG01036139001;pid=GSVIVG01036139001;tid=GSVIVT01036139001; + chr6 No
ZM03G41660 zma hypothetical protein LOC100272635 name=GRMZM2G092021;tid=GRMZM2G092021_T01;pid=GRMZM2G092021_P01;transcript=eq;prot=eq; + 3 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier