Sub-family  

Parent family
HOM000044
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO010820 has 18 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 18 records out of 18 total, starting on record 1, ending on 18

gene_id species description comment strand chr outlier
AL5G32900 aly name=scaffold_503460.1;pid=907756;prot=eq;tid=939269 - scaffold_5 No
AT3G61960 ath Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Protein kinase superfamily protein transcript=eq;prot=eq; - 3 No
BD1G77080 bdi CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed, subfamily CAMK_like(CAMK_1)_ULKh_APGy pid=Bradi1g77080.1;tid=Bradi1g77080.1;GeneName=Bradi1g77080;transcript=eq;prot=eq - Bd1 No
FV7G04130 fve Serine/threonine-protein kinase ATG1 (probable) transcript=eq;prot=eq;pid=gene18600 + LG7 No
GM07G05400 gma 07 pid=16266279;transcript=eq;prot=eq;name=Glyma07g05400.1 + Gm07 No
GM16G01970 gma 16 pid=16301156;transcript=eq;prot=eq;name=Glyma16g01970.1 + Gm16 No
MD01G007580 mdo transcript=eq;prot=eq;pid=MDP0000163493;tid=MDP0000163493;contig=MDC001445.398 - 1 No
MD05G017480 mdo transcript=eq;prot=eq;pid=MDP0000289008;tid=MDP0000289008;contig=MDC010598.350 - 5 No
ME03581G00080 mes PACid=17975741;RNAname=cassava4.1_003655m;GeneName=cassava4.1_003655m.g;transcript=eq;prot=eq + scaffold03581 No
OS03G02980 osa CAMK%5FCAMK%5Flike%5FULKh%5FAPGy%2E1 %2D CAMK includes calcium%2Fcalmodulin depedent protein kinases, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G01990 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC004992; + Chr03 No
PT02G18010 ptr PACid=17336626;name=POPTR_0002s18200;alias=pt020157m; transcript=eq;prot=eq;protein_id=17336626; - scaffold_2 No
PT14G10080 ptr PACid=17309750;name=POPTR_0014s10270;alias=pt035178m,eugene3.00140523; transcript=eq;prot=eq;protein_id=17309750; - scaffold_14 No
RC30076G00290 rco name=30076.m004465;gene=30076.t000029;note=30076.t000029;transcript=eq;prot=eq - 30076 No
SB01G049100 sbi 1 prot=eq;pid=5050334;tid=5050334 - chr_1 No
TC01G033550 tca RNAname=Tc01_t033550;GeneName=Tc01_g033550;transcript=eq;prot=eq + Tc01 No
VV15G07590 vvi name=GSVIVG01027458001; transcript=eq;prot=eq;name=GSVIVG01027458001;pid=GSVIVG01027458001;tid=GSVIVT01027458001; + chr15 No
ZM01G01440 zma hypothetical protein LOC100217148 name=GRMZM2G105415;tid=GRMZM2G105415_T01;pid=GRMZM2G105415_P01;transcript=eq;prot=eq; + 1 No
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