Sub-family  

Parent family
HOM000813
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO010234 has 19 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL6G24020 aly name=fgenesh2_kg.6__2404__AT5G24130.1;pid=489270;prot=eq;tid=489270 + scaffold_6 No
AT5G24130 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). transcript=eq;prot=eq; + 5 No
BD3G09650 bdi pid=Bradi3g09650.1;tid=Bradi3g09650.1;GeneName=Bradi3g09650;transcript=eq;prot=eq - Bd3 No
CP00034G01440 cpa name=evm.TU.supercontig_34.144;pid=evm.TU.supercontig_34.144;prot=eq;transcript=eq + supercontig_34 No
FV7G36870 fve General transcription factor IIF subunit 1 (TFIIF-alpha) (probable) transcript=eq;prot=eq;pid=gene13105 - LG7 No
GM04G41670 gma 04 pid=16257554;transcript=eq;prot=eq;name=Glyma04g41670.1 - Gm04 No
GM06G13120 gma 06 pid=16262759;transcript=eq;prot=eq;name=Glyma06g13120.1 + Gm06 No
LJ0G108370 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_034506;name=LjSGA_034506.1 - LjSGA_034506 No
ME06089G00230 mes PACid=17989948;RNAname=cassava4.1_026741m;GeneName=cassava4.1_026741m.g;transcript=eq;prot=eq - scaffold06089 No
OS02G15740 osa expressed protein transcript=eq;prot=eq; - 2 No
OSINDICA_02G14880 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC013229; - Chr02 No
PP00343G00300 ppa NULL name=e_gw1.343.16.1,pid=151752,prot=eq,tid=151752 + scaffold_343 No
PT12G01250 ptr PACid=17319619;name=POPTR_0012s01440;alias=pt016123m,eugene3.03830005; transcript=eq;prot=eq;protein_id=17319619; + scaffold_12 No
PT15G02090 ptr PACid=17312569;name=POPTR_0015s02280;alias=pt000873m,eugene3.01970004; transcript=eq;prot=eq;protein_id=17312569; - scaffold_15 No
RC29742G00170 rco name=29742.m001381;gene=29742.t000017;note=29742.t000017;transcript=eq;prot=eq - 29742 No
SB04G009370 sbi 4 prot=eq;pid=5054984;tid=5054984 - chr_4 No
TC03G017500 tca RNAname=Tc03_t017500;GeneName=Tc03_g017500;transcript=eq;prot=eq - Tc03 No
VV16G06710 vvi name=GSVIVG01028702001; transcript=eq;prot=eq;name=GSVIVG01028702001;pid=GSVIVG01028702001;tid=GSVIVT01028702001; - chr16 No
ZM05G25490 zma Putative uncharacterized protein name=GRMZM2G165726;tid=GRMZM2G165726_T01;pid=GRMZM2G165726_P01;transcript=eq;prot=eq; - 5 No
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