Sub-family  

Parent family
HOM004638
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (2 genes)
rco
Ricinus communis (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)



The gene family ORTHO010090 has 19 genes in 10 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL4G26030 aly name=scaffold_402705.1;pid=903204;prot=eq;tid=934717 - scaffold_4 No
AL4G26040 aly name=scaffold_402706.1;pid=903205;prot=eq;tid=934718 - scaffold_4 No
AT2G39518 ath Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G39530.1); Has 160 Blast hits to 160 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Uncharacterised protein family (UPF0497) transcript=eq;prot=eq; - 2 No
AT2G39530 ath Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G39518.1); Has 200 Blast hits to 200 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Uncharacterised protein family (UPF0497) transcript=eq;prot=eq; - 2 No
CP00361G00010 cpa name=evm.TU.supercontig_361.1;pid=evm.TU.supercontig_361.1;prot=eq;transcript=eq - supercontig_361 No
FV7G26630 fve UPF0497 membrane protein At2g39518 (probable) transcript=eq;prot=eq;pid=gene26627 - LG7 No
GM02G10230 gma 02 pid=16247598;transcript=eq;prot=eq;name=Glyma02g10230.1 - Gm02 No
GM02G10240 gma 02 pid=16247599;transcript=eq;prot=eq;name=Glyma02g10240.1 - Gm02 No
GM18G52670 gma 18 pid=16311261;transcript=eq;prot=eq;name=Glyma18g52670.1 + Gm18 No
GM18G52680 gma 18 pid=16311262;transcript=eq;prot=eq;name=Glyma18g52680.1 + Gm18 No
GM18G52700 gma 18 pid=16311264;transcript=eq;prot=eq;name=Glyma18g52700.1 + Gm18 No
ME08799G00900 mes PACid=17984709;RNAname=cassava4.1_030921m;GeneName=cassava4.1_030921m.g;transcript=eq;prot=eq + scaffold08799 No
MT7G024730 mtr UPF0497 membrane protein 17 (AHRD V1 ***- C6T1Z6); contains Interpro domain(s) IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup transcript=eq;prot=eq;pid=Medtr7g024730.1; + 7 No
MT7G024750 mtr UPF0497 membrane protein 17 (AHRD V1 ***- C6T1Z6); contains Interpro domain(s) IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup transcript=eq;prot=eq;pid=Medtr7g024750.1; + 7 No
RC30003G00020 rco name=30003.m000321;gene=30003.t000002;note=30003.t000002;transcript=eq;prot=eq + 30003 No
RC30003G00030 rco name=30003.m000322;gene=30003.t000003;note=30003.t000003;transcript=eq;prot=eq + 30003 No
TC10G003370 tca RNAname=Tc10_t003370;GeneName=Tc10_g003370;transcript=eq;prot=eq - Tc10 No
VV13G05270 vvi name=GSVIVG01016540001; transcript=eq;prot=eq;name=GSVIVG01016540001;pid=GSVIVG01016540001;tid=GSVIVT01016540001; - chr13 No
VV13G05280 vvi name=GSVIVG01016541001; transcript=eq;prot=eq;name=GSVIVG01016541001;pid=GSVIVG01016541001;tid=GSVIVT01016541001; - chr13 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier