Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO010081 has 19 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL4G22140 aly name=fgenesh2_kg.4__1705__AT2G36670.1;pid=482645;prot=eq;tid=482645 - scaffold_4 No
AT2G36670 ath Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Eukaryotic aspartyl protease family protein transcript=eq;prot=eq; - 2 No
CP00005G01170 cpa name=evm.TU.supercontig_5.117;pid=evm.TU.supercontig_5.117;prot=eq;transcript=eq - supercontig_5 No
FV6G45330 fve Aspartic proteinase-like protein 2, Precursor (probable) transcript=eq;prot=eq;pid=gene00946 - LG6 No
GM10G07270 gma 10 pid=16278865;transcript=eq;prot=eq;name=Glyma10g07270.1 + Gm10 No
GM13G21180 gma 13 pid=16291047;transcript=eq;prot=eq;name=Glyma13g21180.1 + Gm13 No
MD00G104080 mdo transcript=eq;prot=eq;pid=MDP0000121524;tid=MDP0000121524;contig=MDC004435.146 + MDC004435.146 No
MD00G104090 mdo transcript=eq;prot=eq;pid=MDP0000121525;tid=MDP0000121525;contig=MDC004435.147 - MDC004435.147 No
MD00G104100 mdo transcript=eq;prot=eq;pid=MDP0000121526;tid=MDP0000121526;contig=MDC004435.147 + MDC004435.147 No
MD00G164490 mdo transcript=eq;prot=eq;pid=MDP0000319175;tid=MDP0000319175;contig=MDC007047.429 + MDC007047.429 No
MD00G300630 mdo transcript=eq;prot=eq;pid=MDP0000201326;tid=MDP0000201326;contig=MDC012789.316 + MDC012789.316 No
ME03199G00080 mes PACid=17982363;RNAname=cassava4.1_022068m;GeneName=cassava4.1_022068m.g;transcript=eq;prot=eq - scaffold03199 No
ME06550G00020 mes PACid=17961037;RNAname=cassava4.1_006256m;GeneName=cassava4.1_006256m.g;transcript=eq;prot=eq + scaffold06550 No
MT1G061940 mtr Aspartic proteinase-like protein 2 (AHRD V1 ***- Q9S9K4); contains Interpro domain(s) IPR001461 Peptidase A1 transcript=eq;prot=eq;pid=Medtr1g061940.1; - 1 No
PT06G11840 ptr PACid=17334547;name=POPTR_0006s12030;alias=pt017603m; transcript=eq;prot=eq;protein_id=17334547; - scaffold_6 No
PT16G10390 ptr PACid=17304207;name=POPTR_0016s10960;alias=pt002953m,eugene3.00160907; transcript=eq;prot=eq;protein_id=17304207; + scaffold_16 No
RC30078G00060 rco name=30078.m002214;gene=30078.t000007;note=30078.t000007;transcript=eq;prot=eq - 30078 No
TC05G007650 tca RNAname=Tc05_t007650;GeneName=Tc05_g007650;transcript=eq;prot=eq + Tc05 No
VV08G11010 vvi name=GSVIVG01033723001; transcript=eq;prot=eq;name=GSVIVG01033723001;pid=GSVIVG01033723001;tid=GSVIVT01033723001; - chr8 No
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