Sub-family  

Parent family
HOM001153
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO010069 has 19 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL4G12040 aly name=fgenesh2_kg.4__765__AT2G28060.1;pid=481705;prot=eq;tid=481705 + scaffold_4 No
AT2G28060 ath 5'-AMP-activated protein kinase beta-2 subunit protein; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.2); Has 379 Blast hits to 379 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 21; Plants - 141; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).;5'-AMP-activated protein kinase beta-2 subunit protein transcript=eq;prot=eq; - 2 No
BD2G01490 bdi AMP-activated protein kinase activity (Blast2GO) pid=Bradi2g01490.3;tid=Bradi2g01490.3;GeneName=Bradi2g01490;transcript=eq;prot=eq + Bd2 No
FV2G24070 fve SNF1-related protein kinase regulatory subunit beta-2 (AKIN beta-2) (similar to) transcript=eq;prot=eq;pid=gene20213 + LG2 No
GM12G08370 gma 12 pid=16286854;transcript=eq;prot=eq;name=Glyma12g08370.1 + Gm12 No
MD00G448650 mdo transcript=eq;prot=eq;pid=MDP0000724101;tid=MDP0000724101;contig=MDC020608.143 + MDC020608.143 No
MD03G009560 mdo transcript=eq;prot=eq;pid=MDP0000808631;tid=MDP0000808631;contig=MDC019540.215 + 3 No
ME08316G00250 mes PACid=17963886;RNAname=cassava4.1_018718m;GeneName=cassava4.1_018718m.g;transcript=eq;prot=eq + scaffold08316 No
ME10509G00050 mes PACid=17976879;RNAname=cassava4.1_019497m;GeneName=cassava4.1_019510m.g;transcript=eq;prot=eq + scaffold10509 No
MT0G31950 mtr SNF1-related protein kinase regulatory subunit beta-2 (AHRD V1 ***- Q9SCY5); contains Interpro domain(s) IPR006828 5-AMP-activated protein kinase, beta subunit, complex-interacting region transcript=eq;prot=eq;pid=AC235487_31.1; - AC235487.1 No
OS09G20010 osa SNF1%2Drelated protein kinase regulatory subunit beta%2D2, putative, expressed transcript=eq;prot=eq; + 9 No
OSINDICA_09G14660 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC028479; + Chr09 No
PT04G21220 ptr PACid=17326509;name=POPTR_0004s22360;alias=pt007570m,eugene3.00660287; transcript=eq;prot=eq;protein_id=17326509; + scaffold_4 No
PT09G01240 ptr PACid=17345147;name=POPTR_0009s01430;alias=pt005402m; transcript=eq;prot=eq;protein_id=17345147; - scaffold_9 No
RC29589G00010 rco name=29589.m001222;gene=29589.t000001;note=29589.t000001;transcript=eq;prot=eq + 29589 No
SB07G027110 sbi 7 prot=eq;pid=5044152;tid=5044152 - chr_7 No
TC09G033770 tca RNAname=Tc09_t033770;GeneName=Tc09_g033770;transcript=eq;prot=eq + Tc09 No
VV06G09230 vvi name=GSVIVG01031523001; transcript=eq;prot=eq;name=GSVIVG01031523001;pid=GSVIVG01031523001;tid=GSVIVT01031523001; + chr6 No
ZM01G33080 zma SNF1-related protein kinase regulatory subunit beta-2 name=GRMZM2G070163;tid=GRMZM2G070163_T01;pid=GRMZM2G070163_P01;transcript=eq;prot=eq; + 1 No
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