Sub-family  

Parent family
HOM000033
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO010068 has 19 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL4G12030 aly name=fgenesh2_kg.4__764__AT2G28070.1;pid=481704;prot=eq;tid=481704 - scaffold_4 No
AT2G28070 ath ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: white-brown complex homolog protein 11 (TAIR:AT1G17840.1); Has 248098 Blast hits to 239858 proteins in 3812 species: Archae - 4857; Bacteria - 200822; Metazoa - 5202; Fungi - 4273; Plants - 3947; Viruses - 6; Other Eukaryotes - 28991 (source: NCBI BLink).;ABC-2 type transporter family protein transcript=eq;prot=eq; + 2 No
BD1G00760 bdi ATPase activity, coupled to transmembrane movement of substances (Blast2GO) pid=Bradi1g00760.1;tid=Bradi1g00760.1;GeneName=Bradi1g00760;transcript=eq;prot=eq + Bd1 No
CP00001G00170 cpa name=evm.TU.supercontig_1.17;pid=evm.TU.supercontig_1.17;prot=eq;transcript=eq + supercontig_1 No
GM12G30070 gma 12 pid=16288362;transcript=eq;prot=eq;name=Glyma12g30070.1 + Gm12 No
GM13G39820 gma 13 pid=16293211;transcript=eq;prot=eq;name=Glyma13g39820.1 - Gm13 No
GM20G12110 gma 20 pid=16315892;transcript=eq;prot=eq;name=Glyma20g12110.1 - Gm20 No
MD00G125810 mdo transcript=eq;prot=eq;pid=MDP0000257415;tid=MDP0000257415;contig=MDC005346.126 - MDC005346.126 No
ME08316G00280 mes PACid=17963876;RNAname=cassava4.1_002510m;GeneName=cassava4.1_002510m.g;transcript=eq;prot=eq + scaffold08316 No
MT0G31850 mtr White-brown-complex ABC transporter family (AHRD V1 ***- B9HQM2_POPTR); contains Interpro domain(s) IPR013525 ABC-2 type transporter transcript=eq;prot=eq;pid=AC235487_21.1; - AC235487.1 No
OS03G64200 osa ABC%2D2 type transporter, putative, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G61240 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009051; - Chr03 No
PT04G21250 ptr PACid=17336492;name=POPTR_0004s22390;alias=pt006001m; transcript=eq;prot=eq;protein_id=17336492; + scaffold_4 No
PT09G01190 ptr PACid=17333553;name=POPTR_0009s01380;alias=pt004570m; transcript=eq;prot=eq;protein_id=17333553; - scaffold_9 No
RC29589G00060 rco name=29589.m001228;gene=29589.t000007;note=29589.t000007;transcript=eq;prot=eq + 29589 No
SB01G000400 sbi 1 prot=eq;pid=5027921;tid=5027921 + chr_1 No
TC09G033850 tca RNAname=Tc09_t033850;GeneName=Tc09_g033850;transcript=eq;prot=eq + Tc09 No
VV06G09180 vvi name=GSVIVG01031516001; transcript=eq;prot=eq;name=GSVIVG01031516001;pid=GSVIVG01031516001;tid=GSVIVT01031516001; + chr6 No
ZM01G60130 zma hypothetical protein LOC100194127 name=GRMZM2G135199;tid=GRMZM2G135199_T01;pid=GRMZM2G135199_P01;transcript=eq;prot=eq; - 1 No
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