Sub-family  

Parent family
HOM000044
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009973 has 19 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL2G27300 aly name=Al_scaffold_0002_2538;pid=877944;prot=eq;tid=909457 - scaffold_2 No
AT1G78290 ath Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Protein kinase superfamily protein transcript=eq;prot=eq; - 1 No
BD1G60720 bdi CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed, subfamily CAMK_like(CAMK_1) pid=Bradi1g60720.1;tid=Bradi1g60720.1;GeneName=Bradi1g60720;transcript=eq;prot=eq + Bd1 No
CP00036G01630 cpa name=evm.TU.supercontig_36.163;pid=evm.TU.supercontig_36.163;prot=eq;transcript=eq - supercontig_36 No
FV5G19690 fve Serine/threonine-protein kinase SAPK2 (similar to) transcript=eq;prot=eq;pid=gene11971 - LG5 No
GM02G37090 gma 02 pid=16249317;transcript=eq;prot=eq;name=Glyma02g37090.1 - Gm02 No
GM14G35380 gma 14 pid=16296497;transcript=eq;prot=eq;name=Glyma14g35380.1 - Gm14 No
LJ1G002600 lja prot=eq;transcript=eq;scaffold=CM0016;name=chr1.CM0016.110.nd - chr1 No
MD11G021310 mdo transcript=eq;prot=eq;pid=MDP0000816297;tid=MDP0000816297;contig=MDC003180.503 - 11 No
ME02315G00020 mes PACid=17992088;RNAname=cassava4.1_011318m;GeneName=cassava4.1_011318m.g;transcript=eq;prot=eq + scaffold02315 No
MT5G064540 mtr Serine-threonine protein kinase (AHRD V1 ***- Q09VQ1_WHEAT); contains Interpro domain(s) IPR015740 Plant protein serine/threonine kinase-like IPR002480 DAHP synthetase, class II transcript=eq;prot=eq;pid=Medtr5g064540.1; - 5 No
OS03G27280 osa CAMK%5FCAMK%5Flike%2E19 %2D CAMK includes calcium%2Fcalmodulin depedent protein kinases, expressed transcript=eq;prot=eq; - 3 No
PT02G09800 ptr PACid=17312809;name=POPTR_0002s09990;alias=pt020959m,fgenesh4_pg.C_LG_II000922; transcript=eq;prot=eq;protein_id=17312809; - scaffold_2 No
PT05G16340 ptr PACid=17336916;name=POPTR_0005s17290;alias=pt033250m,estExt_Genewise1_v1.C_LG_V4759; transcript=eq;prot=eq;protein_id=17336916; - scaffold_5 No
RC29908G02150 rco name=29908.m006067;gene=29908.t000118;note=29908.t000118;transcript=eq;prot=eq - 29908 No
SB01G033570 sbi 1 prot=eq;pid=5049322;tid=5049322 + chr_1 No
TC08G008750 tca RNAname=Tc08_t008750;GeneName=Tc08_g008750;transcript=eq;prot=eq + Tc08 No
VV18G03870 vvi name=GSVIVG01009074001; transcript=eq;prot=eq;name=GSVIVG01009074001;pid=GSVIVG01009074001;tid=GSVIVT01009074001; - chr18 No
ZM09G19100 zma serine/threonine-protein kinase SAPK1 name=GRMZM2G035809;tid=GRMZM2G035809_T01;pid=GRMZM2G035809_P01;transcript=eq;prot=eq; + 9 No
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