Sub-family  

Parent family
HOM000288
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009934 has 19 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL2G08810 aly name=fgenesh2_kg.2__618__AT1G64890.1;pid=475488;prot=eq;tid=475488 + scaffold_2 No
AT1G64890 ath Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G04570.1); Has 1088 Blast hits to 1079 proteins in 365 species: Archae - 17; Bacteria - 560; Metazoa - 42; Fungi - 5; Plants - 247; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 1 No
BD2G26710 bdi L-amino acid transmembrane transporter activity (Blast2GO) pid=Bradi2g26710.1;tid=Bradi2g26710.1;GeneName=Bradi2g26710;transcript=eq;prot=eq - Bd2 No
CP00043G01390 cpa name=evm.TU.supercontig_43.139;pid=evm.TU.supercontig_43.139;prot=eq;transcript=eq - supercontig_43 No
FV7G33520 fve Surface presentation of antigens protein spaS (probable) transcript=eq;prot=eq;pid=gene12546 - LG7 No
GM09G03370 gma 09 pid=16274638;transcript=eq;prot=eq;name=Glyma09g03370.1 + Gm09 No
GM15G14290 gma 15 pid=16298750;transcript=eq;prot=eq;name=Glyma15g14290.1 + Gm15 No
MD07G021570 mdo transcript=eq;prot=eq;pid=MDP0000524493;tid=MDP0000524493;contig=MDC012053.121 - 7 No
ME11297G00720 mes PACid=17969269;RNAname=cassava4.1_025311m;GeneName=cassava4.1_025311m.g;transcript=eq;prot=eq - scaffold11297 No
OS05G32320 osa integral membrane transporter family protein, putative, expressed transcript=eq;prot=eq; + 5 No
OSINDICA_05G28680 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC021077; + Chr05 No
PT13G07170 ptr PACid=17326801;name=POPTR_0013s07360;alias=pt030697m,fgenesh4_pg.C_LG_XIII000359; transcript=eq;prot=eq;protein_id=17326801; + scaffold_13 No
PT19G05800 ptr PACid=17341176;name=POPTR_0019s05990;alias=pt009952m,estExt_fgenesh4_pg.C_LG_XIX0495; transcript=eq;prot=eq;protein_id=17341176; - scaffold_19 No
RC30148G00700 rco name=30148.m001473;gene=30148.t000072;note=30148.t000072;transcript=eq;prot=eq + 30148 No
SB09G019220 sbi 9 prot=eq;pid=5060434;tid=5060434 + chr_9 No
SM00004G07620 smo proteinId=82201;transcriptId=82201;name=e_gw1.4.1262.1;transcript=eq;prot=eq + scaffold_4 No
TC05G021500 tca RNAname=Tc05_t021500;GeneName=Tc05_g021500;transcript=eq;prot=eq + Tc05 No
VV16G04850 vvi name=GSVIVG01024264001; transcript=eq;prot=eq;name=GSVIVG01024264001;pid=GSVIVG01024264001;tid=GSVIVT01024264001; + chr16 No
ZM06G23470 zma hypothetical protein LOC100194280 name=GRMZM2G053921;tid=GRMZM2G053921_T02;pid=GRMZM2G053921_P02;transcript=ne;prot=eq; + 6 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier