Sub-family  

Parent family
HOM000982
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO009924 has 19 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL2G01090 aly name=fgenesh2_kg.2__87__AT1G63990.1;pid=474957;prot=eq;tid=474957 + scaffold_2 No
AT1G63990 ath Encodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction.;sporulation 11-2 transcript=eq;prot=eq; - 1 No
BD3G16580 bdi ATP binding (Blast2GO) pid=Bradi3g16580.1;tid=Bradi3g16580.1;GeneName=Bradi3g16580;transcript=eq;prot=eq + Bd3 No
CP02704G00020 cpa name=evm.TU.supercontig_2704.2;pid=evm.TU.supercontig_2704.2;prot=eq;transcript=eq + supercontig_2704 No
FV5G03610 fve Meiotic recombination protein SPO11-2 (AtSPO11-2) (putative) transcript=eq;prot=eq;pid=gene31842 - LG5 No
GM11G02370 gma 11 pid=16282420;transcript=eq;prot=eq;name=Glyma11g02370.1 + Gm11 No
MD02G027810 mdo transcript=eq;prot=eq;pid=MDP0000279185;tid=MDP0000279185;contig=MDC006500.554 + 2 No
ME06705G00360 mes PACid=17989479;RNAname=cassava4.1_025662m;GeneName=cassava4.1_025662m.g;transcript=eq;prot=eq - scaffold06705 No
MRCC299_05G00370 mrcc299 name=fgenesh2_pm.C_Chr_05000009;pid=97333;prot=eq;tid=97333;transcript=eq + Chr_05 No
MT5G009990 mtr Meiotic recombination protein SPO11-2 (AHRD V1 ***- Q9M4A1); contains Interpro domain(s) IPR002815 Spo11/DNA topoisomerase VI, subunit A transcript=eq;prot=eq;pid=Medtr5g009990.1; + 5 No
OS08G06050 osa OsTOP6A2 %2D Topoisomerase 6 subunit A homolog 2, expressed transcript=eq;prot=eq; - 8 No
OSINDICA_08G04920 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC025246; - Chr08 No
PP00248G00120 ppa NULL name=e_gw1.248.60.1,pid=146790,prot=eq,tid=146790 + scaffold_248 No
PT01G09700 ptr PACid=17331427;name=POPTR_0001s09890;alias=pt039283m; transcript=eq;prot=eq;protein_id=17331427; - scaffold_1 No
RC35348G00010 rco name=35348.m000013;gene=35348.t000001;note=35348.t000001;transcript=eq;prot=eq - 35348 No
SB07G003800 sbi 7 prot=eq;pid=5043082;tid=5043082 - chr_7 No
SM00064G01200 smo proteinId=423971;transcriptId=423971;name=fgenesh2_pg.C_scaffold_64000111;transcript=eq;prot=eq + scaffold_64 No
TC03G028020 tca RNAname=Tc03_t028020;GeneName=Tc03_g028020;transcript=eq;prot=eq - Tc03 No
VV02G03690 vvi name=GSVIVG01019418001; transcript=eq;prot=eq;name=GSVIVG01019418001;pid=GSVIVG01019418001;tid=GSVIVT01019418001; - chr2 No
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