Sub-family  

Parent family
HOM000172
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO009877 has 19 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19

gene_id species description comment strand chr outlier
AL1G24370 aly name=fgenesh1_pg.C_scaffold_1002079;pid=335514;prot=eq;tid=335514 + scaffold_1 No
AL2G20470 aly name=fgenesh1_pg.C_scaffold_2001495;pid=339396;prot=eq;tid=339396 - scaffold_2 No
AT1G22760 ath Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.;poly(A) binding protein 3 transcript=eq;prot=eq; + 1 No
AT1G71770 ath Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro.;poly(A)-binding protein 5 transcript=eq;prot=eq; - 1 No
CP00026G01230 cpa name=evm.TU.supercontig_26.123;pid=evm.TU.supercontig_26.123;prot=eq;transcript=eq - supercontig_26 No
FV2G20780 fve Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (putative) transcript=eq;prot=eq;pid=gene27559 + LG2 No
GM02G08480 gma 02 pid=16247407;transcript=eq;prot=eq;name=Glyma02g08480.1 + Gm02 No
GM16G27670 gma 16 pid=16303108;transcript=eq;prot=eq;name=Glyma16g27670.1 + Gm16 No
GM20G31120 gma 20 pid=16317454;transcript=eq;prot=eq;name=Glyma20g31120.1 - Gm20 No
MD00G413180 mdo transcript=eq;prot=eq;pid=MDP0000212007;tid=MDP0000212007;contig=MDC018820.163 - MDC018820.163 No
MD00G430500 mdo transcript=eq;prot=eq;pid=MDP0000224417;tid=MDP0000224417;contig=MDC019661.134 + MDC019661.134 No
MD15G009890 mdo transcript=eq;prot=eq;pid=MDP0000286821;tid=MDP0000286821;contig=MDC011542.144 + 15 No
ME06814G00740 mes PACid=17988183;RNAname=cassava4.1_003279m;GeneName=cassava4.1_003279m.g;transcript=eq;prot=eq + scaffold06814 No
MT0G21270 mtr Polyadenylate-binding protein (AHRD V1 **** B6QKP6_PENMQ); contains Interpro domain(s) IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4 transcript=eq;prot=eq;pid=AC233576_5.1; - AC233576.3 No
PT02G06150 ptr PACid=17334082;name=POPTR_0002s06340;alias=pt020082m,Pt-PAB3.1,estExt_fgenesh4_pg.C_LG_II0583; transcript=eq;prot=eq;protein_id=17334082; + scaffold_2 No
PT05G20900 ptr PACid=17327940;name=POPTR_0005s22040;alias=pt032423m,gw1.V.484.1; transcript=eq;prot=eq;protein_id=17327940; - scaffold_5 No
RC28644G00100 rco name=28644.m000904;gene=28644.t000011;note=28644.t000011;transcript=eq;prot=eq - 28644 No
TC00G085630 tca RNAname=Tc00_t085630;GeneName=Tc00_g085630;transcript=eq;prot=eq - Tc00 No
VV00G22410 vvi name=GSVIVG01013699001; transcript=eq;prot=eq;name=GSVIVG01013699001;pid=GSVIVG01013699001;tid=GSVIVT01013699001; + chr18_random No
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