Sub-family  

Parent family
HOM000100
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009539 has 20 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G30720 aly name=fgenesh2_kg.6__2886__AT4G08455.1;pid=489752;prot=eq;tid=489752 + scaffold_6 No
AT4G08455 ath BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G01640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;BTB/POZ domain-containing protein transcript=eq;prot=eq; + 4 No
BD1G53140 bdi BTB pid=Bradi1g53140.1;tid=Bradi1g53140.1;GeneName=Bradi1g53140;transcript=eq;prot=eq - Bd1 No
CP00064G01500 cpa name=evm.TU.supercontig_64.150;pid=evm.TU.supercontig_64.150;prot=eq;transcript=eq - supercontig_64 No
FV2G30480 fve TD and POZ domain-containing protein 4 (probable) transcript=eq;prot=eq;pid=gene10963 - LG2 No
GM04G42350 gma 04 pid=16257626;transcript=eq;prot=eq;name=Glyma04g42350.1 + Gm04 No
GM06G12440 gma 06 pid=16262671;transcript=eq;prot=eq;name=Glyma06g12440.1 - Gm06 No
LJ0G031740 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_014571;name=LjSGA_014571.1 + LjSGA_014571 No
MD15G006950 mdo transcript=eq;prot=eq;pid=MDP0000557841;tid=MDP0000557841;contig=MDC018800.123 + 15 No
ME03087G00030 mes PACid=17985009;RNAname=cassava4.1_013965m;GeneName=cassava4.1_013965m.g;transcript=eq;prot=eq + scaffold03087 No
OS07G15490 osa C2%2DBTB1 %2D Bric%2Da%2DBrac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed transcript=eq;prot=eq; + 7 No
OSINDICA_07G13730 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC023151; + Chr07 No
PT02G07560 ptr PACid=17315243;name=POPTR_0002s07750;alias=pt021219m,estExt_fgenesh4_pm.C_LG_II0347; transcript=eq;prot=eq;protein_id=17315243; + scaffold_2 No
PT05G19470 ptr PACid=17327858;name=POPTR_0005s20610;alias=pt033560m,fgenesh4_pm.C_LG_V000385; transcript=eq;prot=eq;protein_id=17327858; - scaffold_5 No
RC29648G00530 rco name=29648.m001966;gene=29648.t000053;note=29648.t000053;transcript=eq;prot=eq + 29648 No
SB02G007900 sbi 2 prot=eq;pid=5032967;tid=5032967 + chr_2 No
SM00030G00660 smo proteinId=58268;transcriptId=58268;name=gw1.30.480.1;transcript=eq;prot=eq - scaffold_30 No
TC08G010510 tca RNAname=Tc08_t010510;GeneName=Tc08_g010510;transcript=eq;prot=eq + Tc08 No
VV18G01500 vvi name=GSVIVG01008796001; transcript=eq;prot=eq;name=GSVIVG01008796001;pid=GSVIVG01008796001;tid=GSVIVT01008796001; + chr18 No
ZM07G05930 zma LOC100282548 name=GRMZM2G320703;tid=GRMZM2G320703_T02;pid=GRMZM2G320703_P02;transcript=eq;prot=eq; + 7 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier