Sub-family  

Parent family
HOM000421
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO009519 has 20 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G20790 aly name=scaffold_602145.1;pid=910088;prot=eq;tid=941601 - scaffold_6 No
AT5G20510 ath AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 5 transcript=eq;prot=eq; - 5 No
BD2G25120 bdi DNA-dependent ATPase activity (Blast2GO) pid=Bradi2g25120.1;tid=Bradi2g25120.1;GeneName=Bradi2g25120;transcript=eq;prot=eq - Bd2 No
CP00028G00890 cpa name=evm.TU.supercontig_28.89;pid=evm.TU.supercontig_28.89;prot=eq;transcript=eq + supercontig_28 No
FV6G30320 fve PHD finger protein At5g26210 (similar to) transcript=eq;prot=eq;pid=gene15410 + LG6 No
GM09G07970 gma 09 pid=16275144;transcript=eq;prot=eq;name=Glyma09g07970.1 + Gm09 No
GM13G16740 gma 13 pid=16290523;transcript=eq;prot=eq;name=Glyma13g16740.1 - Gm13 No
LJ1G019480 lja prot=eq;transcript=eq;scaffold=CM0133;name=chr1.CM0133.440.nc - chr1 No
MD00G203970 mdo transcript=eq;prot=eq;pid=MDP0000124388;tid=MDP0000124388;contig=MDC008793.116 - MDC008793.116 No
MD15G000530 mdo transcript=eq;prot=eq;pid=MDP0000147523;tid=MDP0000147523;contig=MDC007084.589 + 15 No
ME00368G00090 mes PACid=17984782;RNAname=cassava4.1_014521m;GeneName=cassava4.1_014521m.g;transcript=eq;prot=eq + scaffold00368 No
OS05G34640 osa PHD finger protein, putative, expressed transcript=eq;prot=eq; + 5 No
OSINDICA_05G30940 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC021245; + Chr05 No
PT06G22280 ptr PACid=17305482;name=POPTR_0006s23990;alias=pt018509m,estExt_Genewise1_v1.C_LG_VI2591; transcript=eq;prot=eq;protein_id=17305482; + scaffold_6 No
RC29739G00290 rco name=29739.m003593;gene=29739.t000029;note=29739.t000029;transcript=eq;prot=eq - 29739 No
SB09G020610 sbi 9 prot=eq;pid=5060517;tid=5060517 + chr_9 No
TC09G005370 tca RNAname=Tc09_t005370;GeneName=Tc09_g005370;transcript=eq;prot=eq - Tc09 No
VV04G08720 vvi name=GSVIVG01035442001; transcript=eq;prot=eq;name=GSVIVG01035442001;pid=GSVIVG01035442001;tid=GSVIVT01035442001; - chr4 No
ZM06G24450 zma PHD finger protein name=GRMZM2G016817;tid=GRMZM2G016817_T02;pid=GRMZM2G016817_P02;transcript=eq;prot=eq; + 6 No
ZM08G15620 zma name=GRMZM2G158918;tid=GRMZM2G158918_T01;pid=GRMZM2G158918_P01;transcript=eq;prot=eq; - 8 No
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