Sub-family  

Parent family
HOM000904
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO009356 has 20 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G15220 aly name=scaffold_401548.1;pid=902047;prot=eq;tid=933560 + scaffold_4 No
AT2G30580 ath Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.;DREB2A-interacting protein 2 transcript=eq;prot=eq; + 2 No
BD1G14270 bdi RING, subfamily zinc finger (C3HC4-type RING finger) family protein pid=Bradi1g14270.1;tid=Bradi1g14270.1;GeneName=Bradi1g14270;transcript=eq;prot=eq + Bd1 No
FV2G08200 fve hypothetical protein transcript=eq;prot=eq;pid=gene08209 + LG2 No
GM03G31610 gma 03 pid=16252972;transcript=eq;prot=eq;name=Glyma03g31610.1 + Gm03 No
GM19G34440 gma 19 pid=16313734;transcript=eq;prot=eq;name=Glyma19g34440.1 + Gm19 No
LJ1G046780 lja prot=eq;transcript=eq;scaffold=CM0375;name=chr1.CM0375.100.nd + chr1 No
MD05G013250 mdo transcript=eq;prot=eq;pid=MDP0000273221;tid=MDP0000273221;contig=MDC002901.246 + 5 No
ME02906G00320 mes PACid=17963556;RNAname=cassava4.1_031102m;GeneName=cassava4.1_031102m.g;transcript=eq;prot=eq - scaffold02906 No
ME11998G00150 mes PACid=17986178;RNAname=cassava4.1_007287m;GeneName=cassava4.1_007287m.g;transcript=eq;prot=eq - scaffold11998 No
OS03G43360 osa zinc finger, C3HC4 type domain containing protein, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G41660 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC007649; - Chr03 No
PT02G04310 ptr PACid=17313522;name=POPTR_0002s04500;alias=pt020583m,gw1.II.1626.1; transcript=eq;prot=eq;protein_id=17313522; - scaffold_2 No
PT05G22910 ptr PACid=17314022;name=POPTR_0005s24050;alias=pt032904m,fgenesh4_pg.C_LG_V001344; transcript=eq;prot=eq;protein_id=17314022; + scaffold_5 No
RC29883G00580 rco name=29883.m002004;gene=29883.t000059;note=29883.t000059;transcript=eq;prot=eq + 29883 No
SB08G020500 sbi 8 prot=eq;pid=5059764;tid=5059764 - chr_8 No
TC01G027040 tca RNAname=Tc01_t027040;GeneName=Tc01_g027040;transcript=eq;prot=eq + Tc01 No
VV07G01700 vvi name=GSVIVG01000748001; transcript=eq;prot=eq;name=GSVIVG01000748001;pid=GSVIVG01000748001;tid=GSVIVT01000748001; + chr7 No
ZM01G28820 zma hypothetical protein LOC100191640 name=GRMZM2G180195;tid=GRMZM2G180195_T01;pid=GRMZM2G180195_P01;transcript=eq;prot=eq; - 1 No
ZM01G46980 zma name=GRMZM2G141379;tid=GRMZM2G141379_T01;pid=GRMZM2G141379_P01;transcript=eq;prot=eq; + 1 No
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