Sub-family  

Parent family
HOM000308
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO009334 has 20 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G35580 aly name=Al_scaffold_0003_3459;pid=874818;prot=eq;tid=906331 - scaffold_3 No
AT2G15880 ath Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink).;Leucine-rich repeat (LRR) family protein transcript=eq;prot=eq; - 2 No
BD4G05480 bdi pid=Bradi4g05480.1;tid=Bradi4g05480.1;GeneName=Bradi4g05480;transcript=eq;prot=eq + Bd4 No
CP00062G00690 cpa name=evm.TU.supercontig_62.70;pid=evm.TU.supercontig_62.70;prot=eq;transcript=eq - supercontig_62 No
FV2G18500 fve hypothetical protein transcript=eq;prot=eq;pid=gene31926 - LG2 No
GM04G03830 gma 04 pid=16254764;transcript=eq;prot=eq;name=Glyma04g03830.1 + Gm04 No
GM06G03930 gma 06 pid=16261628;transcript=eq;prot=eq;name=Glyma06g03930.1 + Gm06 No
MD05G006140 mdo transcript=eq;prot=eq;pid=MDP0000765280;tid=MDP0000765280;contig=MDC000682.292 - 5 No
ME03470G00010 mes PACid=17970906;RNAname=cassava4.1_025804m;GeneName=cassava4.1_025804m.g;transcript=ne;prot=eq + scaffold03470 No
MT3G100950 mtr Serine/threonine-protein kinase BRI1-like 2 (AHRD V1 *--- Q9ZPS9); contains Interpro domain(s) IPR013210 Leucine-rich repeat, N-terminal transcript=eq;prot=eq;pid=Medtr3g100950.1; + 3 No
OS12G35710 osa uncharacterized protein At4g06744 precursor, putative, expressed transcript=eq;prot=eq; - 12 No
OSINDICA_12G23950 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC033340; - Chr12 No
PT04G14410 ptr PACid=17312607;name=POPTR_0004s15360;alias=pt008114m; transcript=eq;prot=eq;protein_id=17312607; - scaffold_4 No
PT09G10940 ptr PACid=17314750;name=POPTR_0009s11130;alias=pt005602m; transcript=eq;prot=eq;protein_id=17314750; - scaffold_9 No
PT14G03410 ptr PACid=17317157;name=POPTR_0014s03600;alias=pt035441m; transcript=eq;prot=eq;protein_id=17317157; - scaffold_14 No
RC29851G01440 rco name=29851.m002504;gene=29851.t000146;note=29851.t000146;transcript=eq;prot=eq + 29851 No
SB08G017290 sbi 8 prot=eq;pid=5059627;tid=5059627 - chr_8 No
TC02G008220 tca RNAname=Tc02_t008220;GeneName=Tc02_g008220;transcript=eq;prot=eq + Tc02 No
TC08G001230 tca RNAname=Tc08_t001230;GeneName=Tc08_g001230;transcript=eq;prot=eq - Tc08 No
ZM10G04900 zma name=GRMZM2G300969;tid=GRMZM2G300969_T01;pid=GRMZM2G300969_P01;transcript=ne;prot=eq; - 10 No
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