Sub-family  

Parent family
HOM000560
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009210 has 20 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G00680 aly name=fgenesh2_kg.2__54__AT1G64280.1;pid=474924;prot=eq;tid=474924 + scaffold_2 No
AL7G15940 aly name=fgenesh1_pm.C_scaffold_7001292;pid=329065;prot=eq;tid=329065 - scaffold_7 No
AT1G64280 ath This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens.;regulatory protein (NPR1) transcript=eq;prot=eq; - 1 No
AT4G26120 ath Ankyrin repeat family protein / BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: regulatory protein (NPR1) (TAIR:AT1G64280.1); Has 2068 Blast hits to 1653 proteins in 155 species: Archae - 0; Bacteria - 76; Metazoa - 627; Fungi - 31; Plants - 645; Viruses - 9; Other Eukaryotes - 680 (source: NCBI BLink).;Ankyrin repeat family protein / BTB/POZ domain-containing protein transcript=eq;prot=eq; + 4 No
BD2G05870 bdi BTB pid=Bradi2g05870.1;tid=Bradi2g05870.1;GeneName=Bradi2g05870;transcript=eq;prot=eq - Bd2 No
CP00061G00020 cpa name=evm.TU.supercontig_61.2;pid=evm.TU.supercontig_61.2;prot=eq;transcript=eq + supercontig_61 No
FV1G09280 fve Regulatory protein NPR1 (Nim1) (similar to) transcript=eq;prot=eq;pid=gene12668 - LG1 No
GM09G07440 gma 09 pid=16275090;transcript=eq;prot=eq;name=Glyma09g07440.1 - Gm09 No
MD02G006770 mdo transcript=eq;prot=eq;pid=MDP0000292425;tid=MDP0000292425;contig=MDC010897.300 - 2 No
ME10493G00910 mes PACid=17990703;RNAname=cassava4.1_004235m;GeneName=cassava4.1_004235m.g;transcript=eq;prot=eq + scaffold10493 No
MT2G039880 mtr NPR1 (AHRD V1 ***- Q0ZAK2_CAPAN); contains Interpro domain(s) IPR013069 BTB/POZ transcript=eq;prot=eq;pid=Medtr2g039880.1; - 2 No
OS01G09800 osa BTBA1 %2D Bric%2Da%2DBrac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed transcript=eq;prot=eq; - 1 No
OSINDICA_01G08920 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000626; - Chr01 No
PT06G14850 ptr PACid=17327022;name=POPTR_0006s15040;alias=pt017368m,Pt-NPR1.1,estExt_fgenesh4_pg.C_LG_VI0944; transcript=eq;prot=eq;protein_id=17327022; + scaffold_6 No
RC29912G00680 rco name=29912.m005368;gene=29912.t000094;note=29912.t000094;transcript=eq;prot=eq - 29912 No
SB03G002980 sbi 3 prot=eq;pid=5052495;tid=5052495 + chr_3 No
SM00009G04990 smo proteinId=88313;transcriptId=88313;name=e_gw1.9.344.1;transcript=eq;prot=eq - scaffold_9 No
TC09G007660 tca RNAname=Tc09_t007660;GeneName=Tc09_g007660;transcript=eq;prot=eq + Tc09 No
VV11G03390 vvi name=GSVIVG01015181001; transcript=eq;prot=eq;name=GSVIVG01015181001;pid=GSVIVG01015181001;tid=GSVIVT01015181001; + chr11 No
ZM03G02040 zma LOC100285744 name=GRMZM2G077197;tid=GRMZM2G077197_T01;pid=GRMZM2G077197_P01;transcript=eq;prot=eq; + 3 No
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