Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009174 has 20 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G30590 aly name=scaffold_103287.1;pid=890493;prot=eq;tid=922006 - scaffold_1 No
AL8G02770 aly name=fgenesh1_pg.C_scaffold_8000224;pid=356437;prot=eq;tid=356437 + scaffold_8 No
AT1G29680 ath Protein of unknown function (DUF1264); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT5G45690.1); Has 286 Blast hits to 286 proteins in 122 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 64; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;Protein of unknown function (DUF1264) transcript=eq;prot=eq; - 1 No
AT5G45690 ath Protein of unknown function (DUF1264); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT4G18920.1); Has 288 Blast hits to 288 proteins in 123 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 64; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;Protein of unknown function (DUF1264) transcript=eq;prot=eq; - 5 No
BD2G48790 bdi pid=Bradi2g48790.1;tid=Bradi2g48790.1;GeneName=Bradi2g48790;transcript=eq;prot=eq - Bd2 No
CP00017G01380 cpa name=evm.TU.supercontig_17.138;pid=evm.TU.supercontig_17.138;prot=eq;transcript=eq - supercontig_17 No
FV3G08250 fve Adenomatous polyposis coli protein-related protein 1 (APC-related protein 1) (probable) transcript=eq;prot=eq;pid=gene24848 + LG3 No
GM13G29550 gma 13 pid=16292013;transcript=eq;prot=eq;name=Glyma13g29550.1 - Gm13 No
LJ6G016540 lja prot=eq;transcript=eq;scaffold=CM0118;name=chr6.CM0118.570.nd + chr6 No
ME06582G00600 mes PACid=17971924;RNAname=cassava4.1_030308m;GeneName=cassava4.1_030308m.g;transcript=eq;prot=eq - scaffold06582 No
MT2G017440 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR010686 Protein of unknown function DUF1264 transcript=eq;prot=eq;pid=Medtr2g017440.1; + 2 No
OS01G52830 osa DUF1264 domain containing protein, putative, expressed transcript=eq;prot=eq; - 1 No
OSINDICA_01G50030 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003318; - Chr01 No
PP00317G00380 ppa NULL name=estExt_gwp_gw1.C_3170058,pid=198232,prot=eq,tid=198232 + scaffold_317 No
PP00340G00110 ppa NULL name=estExt_fgenesh1_pm.C_3400002,pid=108889,prot=eq,tid=108889 - scaffold_340 No
RC30026G00620 rco name=30026.m001498;gene=30026.t000062;note=30026.t000062;transcript=eq;prot=eq + 30026 No
SB03G033490 sbi 3 prot=eq;pid=5053642;tid=5053642 - chr_3 No
TC06G013600 tca RNAname=Tc06_t013600;GeneName=Tc06_g013600;transcript=eq;prot=eq - Tc06 No
VV10G02860 vvi name=GSVIVG01021299001; transcript=eq;prot=eq;name=GSVIVG01021299001;pid=GSVIVG01021299001;tid=GSVIVT01021299001; + chr10 No
ZM08G26950 zma secreted protein name=GRMZM2G107570;tid=GRMZM2G107570_T01;pid=GRMZM2G107570_P01;transcript=eq;prot=eq; - 8 No
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