Sub-family  

Parent family
HOM001765
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (3 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009164 has 20 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G25590 aly name=scaffold_102715.1;pid=889921;prot=eq;tid=921434 - scaffold_1 No
AT1G23780 ath F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G23770.1); Has 310 Blast hits to 310 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).;F-box family protein transcript=eq;prot=eq; - 1 No
BD1G69200 bdi F-Box pid=Bradi1g69200.1;tid=Bradi1g69200.1;GeneName=Bradi1g69200;transcript=eq;prot=eq - Bd1 No
CP35687G00010 cpa name=evm.TU.contig_35687.1;pid=evm.TU.contig_35687.1;prot=eq;transcript=eq - contig_35687 No
GM09G15530 gma 09 pid=16275682;transcript=eq;prot=eq;name=Glyma09g15530.1 + Gm09 No
GM10G40160 gma 10 pid=16281599;transcript=eq;prot=eq;name=Glyma10g40160.1 - Gm10 No
GM20G27270 gma 20 pid=16317009;transcript=eq;prot=eq;name=Glyma20g27270.1 + Gm20 No
MD00G151220 mdo transcript=eq;prot=eq;pid=MDP0000262871;tid=MDP0000262871;contig=MDC006504.485 - MDC006504.485 No
MD05G021080 mdo transcript=eq;prot=eq;pid=MDP0000176606;tid=MDP0000176606;contig=MDC006504.484 - 5 No
ME07708G00050 mes PACid=17962323;RNAname=cassava4.1_005318m;GeneName=cassava4.1_005318m.g;transcript=ne;prot=eq - scaffold07708 No
OS03G12940 osa OsFBO13 %2D F%2Dbox and other domain containing protein, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G11370 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005711; - Chr03 No
PP00211G00690 ppa NULL name=estExt_fgenesh1_pg.C_2110076,pid=169520,prot=eq,tid=169520 - scaffold_211 No
PT05G10970 ptr PACid=17345862;name=POPTR_0005s11160;alias=pt043308m,eugene3.00570053; transcript=eq;prot=eq;protein_id=17345862; - scaffold_5 No
RC30099G00710 rco name=30099.m001693;gene=30099.t000072;note=30099.t000072;transcript=eq;prot=eq - 30099 No
SB01G042080 sbi 1 prot=eq;pid=5049877;tid=5049877 - chr_1 No
SM00065G01030 smo proteinId=49051;transcriptId=49051;name=gw1.65.323.1;transcript=eq;prot=eq + scaffold_65 No
TC09G014080 tca RNAname=Tc09_t014080;GeneName=Tc09_g014080;transcript=eq;prot=eq - Tc09 No
VV03G09250 vvi name=GSVIVG01037051001; transcript=eq;prot=eq;name=GSVIVG01037051001;pid=GSVIVG01037051001;tid=GSVIVT01037051001; + chr3 No
ZM01G08630 zma Putative uncharacterized protein name=GRMZM2G180458;tid=GRMZM2G180458_T01;pid=GRMZM2G180458_P01;transcript=eq;prot=eq; + 1 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier