Sub-family  

Parent family
HOM000796
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009117 has 20 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G05120 aly name=fgenesh2_kg.1__512__AT1G05577.1;pid=470558;prot=eq;tid=470558 - scaffold_1 No
AT1G05577 ath CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 167 Blast hits to 166 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).;Domain of unknown function (DUF966) transcript=eq;prot=eq; - 1 No
BD2G51680 bdi pid=Bradi2g51680.1;tid=Bradi2g51680.1;GeneName=Bradi2g51680;transcript=eq;prot=eq + Bd2 No
CP29923G00030 cpa name=evm.TU.contig_29923.3;pid=evm.TU.contig_29923.3;prot=eq;transcript=eq + contig_29923 No
GM08G16910 gma 08 pid=16271424;transcript=eq;prot=eq;name=Glyma08g16910.1 - Gm08 No
GM15G42180 gma 15 pid=16300808;transcript=eq;prot=eq;name=Glyma15g42180.1 + Gm15 No
MD00G012390 mdo transcript=eq;prot=eq;pid=MDP0000164133;tid=MDP0000164133;contig=MDC000509.249 - MDC000509.249 No
MD12G010390 mdo transcript=eq;prot=eq;pid=MDP0000220817;tid=MDP0000220817;contig=MDC019967.163 + 12 No
ME01508G00070 mes PACid=17969759;RNAname=cassava4.1_025631m;GeneName=cassava4.1_025631m.g;transcript=ne;prot=eq + scaffold01508 No
MT2G062310 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR010369 Protein of unknown function DUF966 transcript=eq;prot=eq;pid=Medtr2g062310.1; - 2 No
OS01G57020 osa expressed protein transcript=eq;prot=eq; + 1 No
OSINDICA_01G53890 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003608; + Chr01 No
PT01G23120 ptr PACid=17302804;name=POPTR_0001s23880;alias=pt041887m,fgenesh4_pg.C_scaffold_148000057; transcript=eq;prot=eq;protein_id=17302804; - scaffold_1 No
PT09G02790 ptr PACid=17319418;name=POPTR_0009s02980;alias=pt005731m; transcript=eq;prot=eq;protein_id=17319418; - scaffold_9 No
RC30226G00620 rco name=30226.m002040;gene=30226.t000064;note=30226.t000064;transcript=eq;prot=eq - 30226 No
SB03G036300 sbi 3 prot=eq;pid=5036739;tid=5036739 + chr_3 No
SM00010G03640 smo proteinId=409423;transcriptId=409423;name=fgenesh2_pg.C_scaffold_10000321;transcript=eq;prot=eq + scaffold_10 No
TC08G015460 tca RNAname=Tc08_t015460;GeneName=Tc08_g015460;transcript=eq;prot=eq - Tc08 No
VV13G01480 vvi name=GSVIVG01005997001; transcript=eq;prot=eq;name=GSVIVG01005997001;pid=GSVIVG01005997001;tid=GSVIVT01005997001; - chr13 No
ZM03G30270 zma hypothetical protein LOC100272305 name=GRMZM2G136710;tid=GRMZM2G136710_T01;pid=GRMZM2G136710_P01;transcript=eq;prot=eq; - 3 No
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