Sub-family  

Parent family
HOM000732
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO009092 has 20 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G00220 aly name=fgenesh2_kg.9__10__AT4G13370.1;pid=497045;prot=eq;tid=497045 + scaffold_9 No
AT4G13370 ath Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT3G14170.1); Has 492 Blast hits to 349 proteins in 79 species: Archae - 0; Bacteria - 30; Metazoa - 82; Fungi - 18; Plants - 260; Viruses - 6; Other Eukaryotes - 96 (source: NCBI BLink).;Plant protein of unknown function (DUF936) transcript=eq;prot=eq; - 4 No
BD4G25990 bdi pid=Bradi4g25990.1;tid=Bradi4g25990.1;GeneName=Bradi4g25990;transcript=eq;prot=eq - Bd4 No
CP00023G01260 cpa name=evm.TU.supercontig_23.126;pid=evm.TU.supercontig_23.126;prot=eq;transcript=eq + supercontig_23 No
FV0G34880 fve Serine/arginine repetitive matrix protein 1 (SRm160) (probable) transcript=eq;prot=eq;pid=gene11840 + scf0513146 No
GM05G08020 gma 05 pid=16258622;transcript=eq;prot=eq;name=Glyma05g08020.1 + Gm05 No
GM17G12970 gma 17 pid=16305395;transcript=eq;prot=eq;name=Glyma17g12970.1 - Gm17 No
LJ4G020300 lja prot=eq;transcript=eq;scaffold=LjB15O07;name=chr4.LjB15O07.10.nc - chr4 No
MD00G411370 mdo transcript=eq;prot=eq;pid=MDP0000303770;tid=MDP0000303770;contig=MDC018713.103 - MDC018713.103 No
ME05656G00150 mes PACid=17975361;RNAname=cassava4.1_002748m;GeneName=cassava4.1_002748m.g;transcript=eq;prot=eq - scaffold05656 No
OS11G02740 osa expressed protein transcript=eq;prot=eq; - 11 No
OS12G02710 osa expressed protein transcript=eq;prot=eq; - 12 No
OSINDICA_11G01070 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC033980; - Chr11 No
OSINDICA_12G01800 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC031954; - Chr12 No
PT18G05700 ptr PACid=17336239;name=POPTR_0018s06270;alias=pt008299m,gw1.XVIII.2294.1; transcript=eq;prot=eq;protein_id=17336239; + scaffold_18 No
RC29848G02380 rco name=29848.m004684;gene=29848.t000240;note=29848.t000240;transcript=eq;prot=eq - 29848 No
SB05G001370 sbi 5 prot=eq;pid=5039391;tid=5039391 - chr_5 No
TC09G010280 tca RNAname=Tc09_t010280;GeneName=Tc09_g010280;transcript=eq;prot=eq + Tc09 No
VV11G05620 vvi name=GSVIVG01015437001; transcript=eq;prot=eq;name=GSVIVG01015437001;pid=GSVIVG01015437001;tid=GSVIVT01015437001; + chr11 No
ZM04G28680 zma hypothetical protein LOC100279842 name=GRMZM2G115499;tid=GRMZM2G115499_T01;pid=GRMZM2G115499_P01;transcript=eq;prot=eq; - 4 No
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