Sub-family 
- Id
- ORTHO009048
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000069
- Keywords
-
Overview of gene family content
- cpa
- Carica papaya (3 genes)
- fve
- Fragaria vesca (2 genes)
- mdo
- Malus domestica (6 genes)
- mes
- Manihot esculenta (3 genes)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (2 genes)
- tca
- Theobroma cacao (2 genes)
- vvi
- Vitis vinifera (2 genes)
The gene family ORTHO009048 has 21 genes in 8 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO009048
Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| CP00125G00370 | cpa | name=evm.TU.supercontig_125.37;pid=evm.TU.supercontig_125.37;prot=eq;transcript=eq | - | supercontig_125 | No | |
| CP00125G00380 | cpa | name=evm.TU.supercontig_125.38;pid=evm.TU.supercontig_125.38;prot=eq;transcript=eq | - | supercontig_125 | No | |
| CP03006G00020 | cpa | name=evm.TU.supercontig_3006.2;pid=evm.TU.supercontig_3006.2;prot=eq;transcript=eq | + | supercontig_3006 | No | |
| FV7G20120 | fve | Dihydroflavonol-4-reductase (DFR) (probable) | transcript=eq;prot=eq;pid=gene29479 | - | LG7 | No |
| FV7G20170 | fve | Dihydroflavonol-4-reductase (DFR) (probable) | transcript=eq;prot=eq;pid=gene29483 | - | LG7 | No |
| MD00G037030 | mdo | transcript=eq;prot=eq;pid=MDP0000268879;tid=MDP0000268879;contig=MDC001577.2748 | + | MDC001577.2748 | No | |
| MD00G048720 | mdo | transcript=eq;prot=eq;pid=MDP0000265930;tid=MDP0000265930;contig=MDC002039.270 | - | MDC002039.270 | No | |
| MD00G356070 | mdo | transcript=eq;prot=eq;pid=MDP0000302386;tid=MDP0000302386;contig=MDC015935.54 | - | MDC015935.54 | No | |
| MD02G028580 | mdo | transcript=eq;prot=eq;pid=MDP0000265632;tid=MDP0000265632;contig=MDC001577.2940 | + | 2 | No | |
| MD02G028760 | mdo | transcript=eq;prot=eq;pid=MDP0000077460;tid=MDP0000077460;contig=MDC001577.2919 | + | 2 | No | |
| MD02G028790 | mdo | transcript=eq;prot=eq;pid=MDP0000174059;tid=MDP0000174059;contig=MDC004375.269 | + | 2 | No | |
| ME06659G00270 | mes | PACid=17993938;RNAname=cassava4.1_011799m;GeneName=cassava4.1_011799m.g;transcript=eq;prot=eq | - | scaffold06659 | No | |
| ME11106G00730 | mes | PACid=17986800;RNAname=cassava4.1_011227m;GeneName=cassava4.1_011227m.g;transcript=eq;prot=eq | - | scaffold11106 | No | |
| ME11106G00870 | mes | PACid=17986804;RNAname=cassava4.1_011999m;GeneName=cassava4.1_011999m.g;transcript=eq;prot=eq | - | scaffold11106 | No | |
| PT09G06100 | ptr | PACid=17311371;name=POPTR_0009s06290;alias=pt004829m,Pt-CCR.6,gw1.IX.3396.1; | transcript=eq;prot=eq;protein_id=17311371; | + | scaffold_9 | No |
| RC29864G00290 | rco | name=29864.m001454;gene=29864.t000030;note=29864.t000030;transcript=eq;prot=eq | + | 29864 | No | |
| RC29864G00390 | rco | name=29864.m001464;gene=29864.t000040;note=29864.t000040;transcript=eq;prot=eq | - | 29864 | No | |
| TC01G040310 | tca | RNAname=Tc01_t040310;GeneName=Tc01_g040310;transcript=eq;prot=eq | + | Tc01 | No | |
| TC01G040340 | tca | RNAname=Tc01_t040340;GeneName=Tc01_g040340;transcript=eq;prot=eq | + | Tc01 | No | |
| VV00G25650 | vvi | name=GSVIVG01012388001; | transcript=eq;prot=eq;name=GSVIVG01012388001;pid=GSVIVG01012388001;tid=GSVIVT01012388001; | - | chr13_random | No |