Sub-family 
- Id
- ORTHO008957
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000031
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (1 gene)
- lja
- Lotus japonicus (1 gene)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family ORTHO008957 has 21 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO008957
Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL8G24930 | aly | name=scaffold_802504.1;pid=919104;prot=eq;tid=950617 | + | scaffold_8 | No | |
| AT5G58920 | ath | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | transcript=eq;prot=eq; | + | 5 | No |
| BD2G12857 | bdi | pid=Bradi2g12857.1;tid=Bradi2g12857.1;GeneName=Bradi2g12857;transcript=eq;prot=eq | - | Bd2 | No | |
| CP00112G00580 | cpa | name=evm.TU.supercontig_112.59;pid=evm.TU.supercontig_112.59;prot=eq;transcript=eq | + | supercontig_112 | No | |
| FV3G21850 | fve | 50S ribosomal protein L28 (probable) | transcript=eq;prot=eq;pid=gene07979 | - | LG3 | No |
| GM14G37010 | gma | 14 | pid=16296672;transcript=eq;prot=eq;name=Glyma14g37010.1 | - | Gm14 | No |
| LJ0G446070 | lja | partial;prot=eq;transcript=eq;scaffold=LjT15I01;name=LjT15I01.20.nd | + | chr0 | No | |
| ME04495G00180 | mes | PACid=17970693;RNAname=cassava4.1_017983m;GeneName=cassava4.1_017983m.g;transcript=eq;prot=eq | - | scaffold04495 | No | |
| MT5G069660 | mtr | Unknown Protein (AHRD V1) | transcript=eq;prot=eq;pid=Medtr5g069660.1; | - | 5 | No |
| OS01G26020 | osa | expressed protein | transcript=eq;prot=eq; | + | 1 | No |
| OSINDICA_01G25070 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC001697; | + | Chr01 | No |
| OSINDICA_01G25120 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC001701; | + | Chr01 | No |
| PP00263G00190 | ppa | NULL | name=estExt_gwp_gw1.C_2630029,pid=196332,prot=eq,tid=196332 | + | scaffold_263 | No |
| PT01G24800 | ptr | PACid=17306055;name=POPTR_0001s25560;alias=pt040381m,fgenesh4_pg.C_LG_I001674; | transcript=eq;prot=eq;protein_id=17306055; | - | scaffold_1 | No |
| PT09G04510 | ptr | PACid=17328519;name=POPTR_0009s04700;alias=pt005269m,estExt_fgenesh4_kg.C_LG_IX0040; | transcript=eq;prot=eq;protein_id=17328519; | - | scaffold_9 | No |
| RC29726G01130 | rco | name=29726.m004002;gene=29726.t000114;note=29726.t000114;transcript=eq;prot=eq | - | 29726 | No | |
| RC29751G00050 | rco | name=29751.m001790;gene=29751.t000005;note=29751.t000005;transcript=eq;prot=eq | + | 29751 | No | |
| SB08G021360 | sbi | 8 | prot=eq;pid=5045513;tid=5045513 | + | chr_8 | No |
| TC09G030400 | tca | RNAname=Tc09_t030400;GeneName=Tc09_g030400;transcript=eq;prot=eq | - | Tc09 | No | |
| VV06G02290 | vvi | name=GSVIVG01024797001; | transcript=eq;prot=eq;name=GSVIVG01024797001;pid=GSVIVG01024797001;tid=GSVIVT01024797001; | - | chr6 | No |