Sub-family  

Parent family
HOM001370
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (3 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)



The gene family ORTHO008905 has 21 genes in 13 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G38360 aly name=fgenesh1_pm.C_scaffold_7002746;pid=330519;prot=eq;tid=330519 - scaffold_7 No
ATCG01000 ath hypothetical protein;Ycf1 protein transcript=eq;prot=eq; + chloroplast No
ATCG01130 ath hypothetical protein;Ycf1 protein transcript=eq;prot=eq; - chloroplast No
CPCG01120 cpa ycf1;hypothetical chloroplast RF1;protein_id=ABY86829.1; transl_table=11; - chloroplast No
FV0G59080 fve Putative membrane protein ycf1 (RF1) (similar to) transcript=eq;prot=eq;pid=gene32727 - scf0510636 No
GMCG00980 gma ycf1;hypothetical chloroplast RF1;protein_id=ABC25169.1; transl_table=11; + chloroplast No
LJCG01110 lja ycf1;hypothetical protein;protein_id=BAB33253.1; transl_table=11; - chloroplast No
MD00G127360 mdo transcript=eq;prot=eq;pid=MDP0000352930;tid=MDP0000352930;contig=MDC005425.349 + MDC005425.349 No
MD00G127370 mdo transcript=eq;prot=eq;pid=MDP0000867553;tid=MDP0000867553;contig=MDC005425.350 + MDC005425.350 No
ME06564G00080 mes PACid=17968559;RNAname=cassava4.1_024533m;GeneName=cassava4.1_024533m.g;transcript=eq;prot=eq - scaffold06564 No
MECG01180 mes ycf1;hypothetical chloroplast RF1;protein_id=ABV66211.1; transl_table=11; - chloroplast No
MT0G09590 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR008896 Ycf1 transcript=eq;prot=eq;pid=AC225474_18.1; + AC225474.24 No
MT4G006080 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR008896 Ycf1 transcript=eq;prot=eq;pid=Medtr4g006080.1; + 4 No
MT7G021690 mtr 30S ribosomal protein S15, chloroplastic (AHRD V1 *-*- Q9BBN7); contains Interpro domain(s) IPR008896 Ycf1 transcript=eq;prot=eq;pid=Medtr7g021690.1; + 7 No
PPCG01190 ppa ycf1;hypothetical protein;protein_id=BAC85096.1; ORF1603;transl_table=11; - chloroplast No
PTCG01080 ptr conserved hypothetical protein;protein_id=ABO36758.1; transl_table=11; + chloroplast No
PTCG01200 ptr Ycf1-like;protein_id=ABO36769.1; hypothetical 218 kDa protein;transl_table=11; - chloroplast No
TC04G003700 tca RNAname=Tc04_t003700;GeneName=Tc04_g003700;transcript=eq;prot=eq + Tc04 No
TCCG01120 tca ycf1;hypothetical chloroplast RF1;protein_id=ADO64947.1; transl_table=11; - chloroplast No
VV09G09830 vvi name=GSVIVG01029582001; transcript=eq;prot=eq;name=GSVIVG01029582001;pid=GSVIVG01029582001;tid=GSVIVT01029582001; - chr9 No
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