Sub-family  

Parent family
HOM000004
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO008834 has 21 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G06450 aly name=fgenesh2_kg.7__641__AT4G34500.1;pid=491208;prot=eq;tid=491208 + scaffold_7 No
AT4G34500 ath Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 115678 Blast hits to 114509 proteins in 4424 species: Archae - 123; Bacteria - 13963; Metazoa - 42848; Fungi - 9665; Plants - 32029; Viruses - 413; Other Eukaryotes - 16637 (source: NCBI BLink).;Protein kinase superfamily protein transcript=eq;prot=eq; - 4 No
BD1G69057 bdi pid=Bradi1g69057.1;tid=Bradi1g69057.1;GeneName=Bradi1g69057;transcript=eq;prot=eq - Bd1 No
CP00062G01410 cpa name=evm.TU.supercontig_62.142;pid=evm.TU.supercontig_62.142;prot=eq;transcript=eq - supercontig_62 No
FV5G06970 fve Probable serine/threonine-protein kinase At1g01540 (similar to) transcript=eq;prot=eq;pid=gene20424 + LG5 No
GM04G01440 gma 04 pid=16254467;transcript=eq;prot=eq;name=Glyma04g01440.1 + Gm04 No
GM06G01490 gma 06 pid=16261344;transcript=eq;prot=eq;name=Glyma06g01490.1 + Gm06 No
LJ1G035010 lja partial;prot=eq;transcript=eq;scaffold=CM0150;name=chr1.CM0150.660.nd - chr1 No
MD07G010200 mdo transcript=eq;prot=eq;pid=MDP0000276963;tid=MDP0000276963;contig=MDC003694.298 - 7 No
MD08G002920 mdo transcript=eq;prot=eq;pid=MDP0000256423;tid=MDP0000256423;contig=MDC002873.106 - 8 No
ME04718G00030 mes PACid=17982191;RNAname=cassava4.1_026968m;GeneName=cassava4.1_026968m.g;transcript=eq;prot=eq - scaffold04718 No
MT3G116590 mtr Protein kinase family protein (AHRD V1 ***- C6ZRX6_SOYBN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase transcript=eq;prot=eq;pid=Medtr3g116590.1; - 3 No
OS03G12680 osa protein kinase, putative, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G11140 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005690; - Chr03 No
PT09G11660 ptr PACid=17312679;name=POPTR_0009s11850;alias=pt004713m; transcript=eq;prot=eq;protein_id=17312679; - scaffold_9 No
RC30190G00640 rco name=30190.m010894;gene=30190.t000130;note=30190.t000130;transcript=eq;prot=eq - 30190 No
SB01G041910 sbi 1 prot=eq;pid=5030241;tid=5030241 - chr_1 No
TC02G007060 tca RNAname=Tc02_t007060;GeneName=Tc02_g007060;transcript=eq;prot=eq + Tc02 No
VV03G08430 vvi name=GSVIVG01031962001; transcript=eq;prot=eq;name=GSVIVG01031962001;pid=GSVIVG01031962001;tid=GSVIVT01031962001; - chr3 No
ZM01G08840 zma hypothetical protein LOC100381573 name=GRMZM2G043470;tid=GRMZM2G043470_T01;pid=GRMZM2G043470_P01;transcript=ne;prot=eq; + 1 No
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