Sub-family  

Parent family
HOM000010
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO008776 has 21 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G18620 aly name=fgenesh2_kg.6__1873__AT5G18560.1;pid=488739;prot=eq;tid=488739 - scaffold_6 No
AT5G18560 ath Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.;Integrase-type DNA-binding superfamily protein transcript=eq;prot=eq; - 5 No
BD1G18580 bdi pid=Bradi1g18580.1;tid=Bradi1g18580.1;GeneName=Bradi1g18580;transcript=eq;prot=eq - Bd1 No
CP00016G01530 cpa name=evm.TU.supercontig_16.153;pid=evm.TU.supercontig_16.153;prot=eq;transcript=eq + supercontig_16 No
FV4G12310 fve Ethylene-responsive transcription factor ERF086 (similar to) transcript=eq;prot=eq;pid=gene06790 + LG4 No
GM07G37990 gma 07 pid=16269101;transcript=eq;prot=eq;name=Glyma07g37990.1 - Gm07 No
GM17G02710 gma 17 pid=16304186;transcript=eq;prot=eq;name=Glyma17g02710.1 + Gm17 No
LJ0G450000 lja prot=eq;transcript=eq;scaffold=LjT18C07;name=LjT18C07.30.nc - chr0 No
MD00G088030 mdo transcript=eq;prot=eq;pid=MDP0000778140;tid=MDP0000778140;contig=MDC003755.403 + MDC003755.403 No
MD16G012620 mdo transcript=eq;prot=eq;pid=MDP0000467753;tid=MDP0000467753;contig=MDC018848.214 - 16 No
ME01551G03400 mes PACid=17961809;RNAname=cassava4.1_028754m;GeneName=cassava4.1_028754m.g;transcript=eq;prot=eq + scaffold01551 No
ME09365G00300 mes PACid=17971485;RNAname=cassava4.1_027221m;GeneName=cassava4.1_027221m.g;transcript=eq;prot=eq + scaffold09365 No
MT4G119270 mtr Ethylene-responsive transcription factor 10 (AHRD V1 *-*- Q9ZWA2); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding transcript=eq;prot=eq;pid=Medtr4g119270.1; + 4 No
OS07G47330 osa AP2 domain containing protein, expressed transcript=eq;prot=eq; - 7 No
OSINDICA_07G39180 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC042692; - Chr07 No
PT08G22180 ptr PACid=17312443;name=POPTR_0008s22750;alias=pt027363m; transcript=eq;prot=eq;protein_id=17312443; - scaffold_8 No
RC29726G01230 rco name=29726.m004013;gene=29726.t000125;note=29726.t000125;transcript=eq;prot=eq + 29726 No
SB02G042400 sbi 2 prot=eq;pid=5034827;tid=5034827 - chr_2 No
TC04G027730 tca RNAname=Tc04_t027730;GeneName=Tc04_g027730;transcript=eq;prot=eq + Tc04 No
ZM02G40580 zma name=GRMZM2G458437;tid=GRMZM2G458437_T01;pid=GRMZM2G458437_P01;transcript=eq;prot=eq; - 2 No
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