Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO008728 has 21 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G00550 aly name=scaffold_600056.1;pid=907999;prot=eq;tid=939512 - scaffold_6 No
AT5G01510 ath ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).;Protein of unknown function, DUF647 transcript=eq;prot=eq; + 5 No
BD2G02740 bdi pid=Bradi2g02740.1;tid=Bradi2g02740.1;GeneName=Bradi2g02740;transcript=eq;prot=eq + Bd2 No
CP00011G01430 cpa name=evm.TU.supercontig_11.144;pid=evm.TU.supercontig_11.144;prot=eq;transcript=eq + supercontig_11 No
CR03G08160 cre name=e_gwW.14.107.1;pid=115526;prot=eq;tid=115526;transcript=eq - chromosome_3 No
FV6G10540 fve UPF0420 protein (probable) transcript=eq;prot=eq;pid=gene18864 + LG6 No
GM07G18120 gma 07 pid=16267660;transcript=eq;prot=eq;name=Glyma07g18120.1 - Gm07 No
GM18G42930 gma 18 pid=16310279;transcript=eq;prot=eq;name=Glyma18g42930.1 - Gm18 No
LJ0G420700 lja partial;prot=eq;transcript=eq;scaffold=LjT35D08;name=LjT35D08.180.nd - chr0 No
MD04G012260 mdo transcript=eq;prot=eq;pid=MDP0000271200;tid=MDP0000271200;contig=MDC004219.393 - 4 No
ME03597G00030 mes PACid=17985016;RNAname=cassava4.1_023738m;GeneName=cassava4.1_023738m.g;transcript=eq;prot=eq + scaffold03597 No
MT7G068310 mtr UPF0420 protein C16orf58 homolog (AHRD V1 ***- Q5R8F6); contains Interpro domain(s) IPR006968 Protein of unknown function DUF647 transcript=eq;prot=eq;pid=Medtr7g068310.1; - 7 No
OS01G04860 osa DUF647 domain containing protein, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G04340 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000283; + Chr01 No
PT06G09870 ptr PACid=17307517;name=POPTR_0006s10060;alias=pt017582m,estExt_fgenesh4_pg.C_LG_VI0802; transcript=eq;prot=eq;protein_id=17307517; - scaffold_6 No
RC29701G00190 rco name=29701.m000598;gene=29701.t000019;note=29701.t000019;transcript=eq;prot=eq + 29701 No
SB03G006560 sbi 3 prot=eq;pid=5035309;tid=5035309 - chr_3 No
SM00000G03530 smo proteinId=75120;transcriptId=75120;name=e_gw1.0.2160.1;transcript=eq;prot=eq + scaffold_0 No
TC05G002560 tca RNAname=Tc05_t002560;GeneName=Tc05_g002560;transcript=eq;prot=eq + Tc05 No
VC00057G00260 vca name=fgenesh5_synt.57__9;pid=119273;prot=eq;tid=119273 + scaffold_57 No
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