Sub-family 
- Id
- ORTHO008721
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000055
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (1 gene)
- mes
- Manihot esculenta (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family ORTHO008721 has 21 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : ORTHO008721
Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL5G30900 | aly | name=Al_scaffold_0005_2954;pid=867475;prot=eq;tid=898988 | - | scaffold_5 | No | |
| AL5G30910 | aly | name=fgenesh2_kg.5__2493__AT3G60280.1;pid=486501;prot=eq;tid=486501 | - | scaffold_5 | No | |
| AT3G60270 | ath | Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 2 (TAIR:AT2G44790.1); Has 2285 Blast hits to 1861 proteins in 153 species: Archae - 3; Bacteria - 173; Metazoa - 13; Fungi - 54; Plants - 1712; Viruses - 73; Other Eukaryotes - 257 (source: NCBI BLink).;Cupredoxin superfamily protein | transcript=eq;prot=eq; | - | 3 | No |
| AT3G60280 | ath | Encodes blue copper-binding protein III.;uclacyanin 3 | transcript=eq;prot=eq; | - | 3 | No |
| BD3G50410 | bdi | copper ion binding (Blast2GO) | pid=Bradi3g50410.1;tid=Bradi3g50410.1;GeneName=Bradi3g50410;transcript=eq;prot=eq | - | Bd3 | No |
| CP00022G00490 | cpa | name=evm.TU.supercontig_22.49;pid=evm.TU.supercontig_22.49;prot=eq;transcript=eq | + | supercontig_22 | No | |
| FV7G12770 | fve | Blue copper protein, Precursor (probable) | transcript=eq;prot=eq;pid=gene04876 | - | LG7 | No |
| GM03G26060 | gma | 03 | pid=16252362;transcript=eq;prot=eq;name=Glyma03g26060.1 | - | Gm03 | No |
| GM07G13840 | gma | 07 | pid=16267207;transcript=eq;prot=eq;name=Glyma07g13840.1 | - | Gm07 | No |
| LJ0G029870 | lja | prot=eq;transcript=eq;scaffold=LjSGA_014101;name=LjSGA_014101.3.1 | - | LjSGA_014101 | No | |
| ME08265G04300 | mes | PACid=17988877;RNAname=cassava4.1_016918m;GeneName=cassava4.1_016918m.g;transcript=eq;prot=eq | - | scaffold08265 | No | |
| OS02G43660 | osa | plastocyanin%2Dlike domain containing protein, putative, expressed | transcript=eq;prot=eq; | - | 2 | No |
| OSINDICA_02G42100 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC014900; | - | Chr02 | No |
| PT14G04660 | ptr | PACid=17317833;name=POPTR_0014s04850;alias=pt036228m; | transcript=eq;prot=eq;protein_id=17317833; | + | scaffold_14 | No |
| RC29709G00020 | rco | name=29709.m001166;gene=29709.t000002;note=29709.t000002;transcript=eq;prot=eq | + | 29709 | No | |
| SB04G033180 | sbi | 4 | prot=eq;pid=5055878;tid=5055878 | + | chr_4 | No |
| SM00000G12470 | smo | proteinId=29265;transcriptId=29265;name=gw1.0.1008.1;transcript=eq;prot=eq | - | scaffold_0 | No | |
| TC01G039350 | tca | RNAname=Tc01_t039350;GeneName=Tc01_g039350;transcript=eq;prot=eq | + | Tc01 | No | |
| VV15G01250 | vvi | name=GSVIVG01018292001; | transcript=eq;prot=eq;name=GSVIVG01018292001;pid=GSVIVG01018292001;tid=GSVIVT01018292001; | - | chr15 | No |
| ZM04G20240 | zma | blue copper protein | name=GRMZM2G082940;tid=GRMZM2G082940_T01;pid=GRMZM2G082940_P01;transcript=eq;prot=eq; | - | 4 | No |