Sub-family  

Parent family
HOM000055
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO008721 has 21 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G30900 aly name=Al_scaffold_0005_2954;pid=867475;prot=eq;tid=898988 - scaffold_5 No
AL5G30910 aly name=fgenesh2_kg.5__2493__AT3G60280.1;pid=486501;prot=eq;tid=486501 - scaffold_5 No
AT3G60270 ath Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 2 (TAIR:AT2G44790.1); Has 2285 Blast hits to 1861 proteins in 153 species: Archae - 3; Bacteria - 173; Metazoa - 13; Fungi - 54; Plants - 1712; Viruses - 73; Other Eukaryotes - 257 (source: NCBI BLink).;Cupredoxin superfamily protein transcript=eq;prot=eq; - 3 No
AT3G60280 ath Encodes blue copper-binding protein III.;uclacyanin 3 transcript=eq;prot=eq; - 3 No
BD3G50410 bdi copper ion binding (Blast2GO) pid=Bradi3g50410.1;tid=Bradi3g50410.1;GeneName=Bradi3g50410;transcript=eq;prot=eq - Bd3 No
CP00022G00490 cpa name=evm.TU.supercontig_22.49;pid=evm.TU.supercontig_22.49;prot=eq;transcript=eq + supercontig_22 No
FV7G12770 fve Blue copper protein, Precursor (probable) transcript=eq;prot=eq;pid=gene04876 - LG7 No
GM03G26060 gma 03 pid=16252362;transcript=eq;prot=eq;name=Glyma03g26060.1 - Gm03 No
GM07G13840 gma 07 pid=16267207;transcript=eq;prot=eq;name=Glyma07g13840.1 - Gm07 No
LJ0G029870 lja prot=eq;transcript=eq;scaffold=LjSGA_014101;name=LjSGA_014101.3.1 - LjSGA_014101 No
ME08265G04300 mes PACid=17988877;RNAname=cassava4.1_016918m;GeneName=cassava4.1_016918m.g;transcript=eq;prot=eq - scaffold08265 No
OS02G43660 osa plastocyanin%2Dlike domain containing protein, putative, expressed transcript=eq;prot=eq; - 2 No
OSINDICA_02G42100 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC014900; - Chr02 No
PT14G04660 ptr PACid=17317833;name=POPTR_0014s04850;alias=pt036228m; transcript=eq;prot=eq;protein_id=17317833; + scaffold_14 No
RC29709G00020 rco name=29709.m001166;gene=29709.t000002;note=29709.t000002;transcript=eq;prot=eq + 29709 No
SB04G033180 sbi 4 prot=eq;pid=5055878;tid=5055878 + chr_4 No
SM00000G12470 smo proteinId=29265;transcriptId=29265;name=gw1.0.1008.1;transcript=eq;prot=eq - scaffold_0 No
TC01G039350 tca RNAname=Tc01_t039350;GeneName=Tc01_g039350;transcript=eq;prot=eq + Tc01 No
VV15G01250 vvi name=GSVIVG01018292001; transcript=eq;prot=eq;name=GSVIVG01018292001;pid=GSVIVG01018292001;tid=GSVIVT01018292001; - chr15 No
ZM04G20240 zma blue copper protein name=GRMZM2G082940;tid=GRMZM2G082940_T01;pid=GRMZM2G082940_P01;transcript=eq;prot=eq; - 4 No
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