Sub-family 
- Id
- ORTHO008647
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000409
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family ORTHO008647 has 21 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : ORTHO008647
Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
AL4G32390 | aly | name=fgenesh2_kg.4__2654__AT2G44620.1;pid=483594;prot=eq;tid=483594 | + | scaffold_4 | No | |
AT2G44620 | ath | Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble.;mitochondrial acyl carrier protein 1 | transcript=eq;prot=eq; | + | 2 | No |
BD1G53880 | bdi | pid=Bradi1g53880.1;tid=Bradi1g53880.1;GeneName=Bradi1g53880;transcript=eq;prot=eq | - | Bd1 | No | |
CP00052G00620 | cpa | name=evm.TU.supercontig_52.63;pid=evm.TU.supercontig_52.63;prot=eq;transcript=eq | + | supercontig_52 | No | |
FV7G21140 | fve | Acyl carrier protein, mitochondrial (ACP), Precursor (similar to) | transcript=eq;prot=eq;pid=gene03075 | - | LG7 | No |
GM09G38260 | gma | 09 | pid=16277613;transcript=eq;prot=eq;name=Glyma09g38260.1 | - | Gm09 | No |
GM18G48110 | gma | 18 | pid=16310799;transcript=eq;prot=eq;name=Glyma18g48110.1 | + | Gm18 | No |
LJ1G028370 | lja | prot=eq;transcript=eq;scaffold=CM0393;name=chr1.CM0393.430.nd | + | chr1 | No | |
MD00G272830 | mdo | transcript=eq;prot=eq;pid=MDP0000345442;tid=MDP0000345442;contig=MDC011670.200 | - | MDC011670.200 | No | |
MD04G008050 | mdo | transcript=eq;prot=eq;pid=MDP0000201048;tid=MDP0000201048;contig=MDC012910.44 | - | 4 | No | |
ME08265G04010 | mes | PACid=17989031;RNAname=cassava4.1_019232m;GeneName=cassava4.1_019232m.g;transcript=eq;prot=eq | + | scaffold08265 | No | |
MT7G080760 | mtr | Acyl carrier protein (AHRD V1 ***- C6SZE2_SOYBN); contains Interpro domain(s) IPR003231 Acyl carrier protein (ACP) | transcript=eq;prot=eq;pid=Medtr7g080760.1; | + | 7 | No |
OS07G12150 | osa | acyl carrier protein, putative, expressed | transcript=eq;prot=eq; | + | 7 | No |
OSINDICA_07G10630 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC022988; | + | Chr07 | No |
PT14G04160 | ptr | PACid=17320493;name=POPTR_0014s04350;alias=pt036482m,estExt_fgenesh4_pg.C_400150; | transcript=eq;prot=eq;protein_id=17320493; | + | scaffold_14 | No |
RC29709G00410 | rco | name=29709.m001206;gene=29709.t000042;note=29709.t000042;transcript=eq;prot=eq | - | 29709 | No | |
SB02G006530 | sbi | 2 | prot=eq;pid=5050728;tid=5050728 | + | chr_2 | No |
SM00030G02650 | smo | proteinId=104768;transcriptId=104768;name=e_gw1.30.509.1;transcript=eq;prot=eq | + | scaffold_30 | No | |
TC01G039970 | tca | RNAname=Tc01_t039970;GeneName=Tc01_g039970;transcript=eq;prot=eq | - | Tc01 | No | |
VV15G01770 | vvi | name=GSVIVG01018372001; | transcript=eq;prot=eq;name=GSVIVG01018372001;pid=GSVIVG01018372001;tid=GSVIVT01018372001; | - | chr15 | No |