Sub-family  

Parent family
HOM000732
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO008401 has 21 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G25610 aly name=fgenesh1_pm.C_scaffold_1002016;pid=313236;prot=eq;tid=313236 + scaffold_1 No
AT1G23790 ath Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G70340.1); Has 265 Blast hits to 216 proteins in 30 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 7; Plants - 237; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).;Plant protein of unknown function (DUF936) transcript=eq;prot=eq; + 1 No
BD2G00750 bdi pid=Bradi2g00750.1;tid=Bradi2g00750.1;GeneName=Bradi2g00750;transcript=eq;prot=eq + Bd2 No
CP00069G00270 cpa name=evm.TU.supercontig_69.27;pid=evm.TU.supercontig_69.27;prot=eq;transcript=eq - supercontig_69 No
FV4G21690 fve Leucine-rich repeat-containing protein 50 homolog (probable) transcript=eq;prot=eq;pid=gene00641 - LG4 No
GM01G03790 gma 01 pid=16243315;transcript=eq;prot=eq;name=Glyma01g03790.1 + Gm01 No
GM02G03930 gma 02 pid=16246896;transcript=eq;prot=eq;name=Glyma02g03930.1 - Gm02 No
LJ2G018100 lja partial;prot=eq;transcript=eq;scaffold=CM0008;name=chr2.CM0008.10.nd - chr2 No
MD00G204190 mdo transcript=eq;prot=eq;pid=MDP0000233070;tid=MDP0000233070;contig=MDC008800.79 - MDC008800.79 No
MD13G006510 mdo transcript=eq;prot=eq;pid=MDP0000260819;tid=MDP0000260819;contig=MDC018919.88 - 13 No
ME06715G00370 mes PACid=17982257;RNAname=cassava4.1_005515m;GeneName=cassava4.1_005515m.g;transcript=eq;prot=eq - scaffold06715 No
MT5G034370 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR010341 Protein of unknown function DUF936, plant transcript=eq;prot=eq;pid=Medtr5g034370.1; + 5 No
OS01G01890 osa expressed protein transcript=eq;prot=eq; + 1 No
OSINDICA_01G01030 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000068; + Chr01 No
PT08G19470 ptr PACid=17310831;name=POPTR_0008s19660;alias=pt026818m; transcript=eq;prot=eq;protein_id=17310831; + scaffold_8 No
PT10G03670 ptr PACid=17312563;name=POPTR_0010s04810;alias=pt011459m; transcript=eq;prot=eq;protein_id=17312563; - scaffold_10 No
RC29631G00460 rco name=29631.m001040;gene=29631.t000047;note=29631.t000047;transcript=eq;prot=eq + 29631 No
SB03G008530 sbi 3 prot=eq;pid=5035438;tid=5035438 - chr_3 No
TC02G023430 tca RNAname=Tc02_t023430;GeneName=Tc02_g023430;transcript=eq;prot=eq - Tc02 No
VV01G13990 vvi name=GSVIVG01020241001; transcript=eq;prot=eq;name=GSVIVG01020241001;pid=GSVIVG01020241001;tid=GSVIVT01020241001; + chr1 No
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