Sub-family  

Parent family
HOM000001
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO008349 has 21 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G05280 aly name=fgenesh2_kg.1__536__AT1G05750.1;pid=470582;prot=eq;tid=470582 + scaffold_1 No
AT1G05750 ath Encodes a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.;Tetratricopeptide repeat (TPR)-like superfamily protein transcript=eq;prot=eq; + 1 No
BD3G57730 bdi pid=Bradi3g57730.1;tid=Bradi3g57730.1;GeneName=Bradi3g57730;transcript=eq;prot=eq + Bd3 No
CP00113G00220 cpa name=evm.TU.supercontig_113.22;pid=evm.TU.supercontig_113.22;prot=eq;transcript=eq + supercontig_113 No
GM12G31350 gma 12 pid=16288511;transcript=eq;prot=eq;name=Glyma12g31350.1 - Gm12 No
GM13G38960 gma 13 pid=16293110;transcript=eq;prot=eq;name=Glyma13g38960.1 + Gm13 No
LJ0G031580 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_014540;name=LjSGA_014540.1 - LjSGA_014540 No
MD00G010540 mdo transcript=eq;prot=eq;pid=MDP0000161831;tid=MDP0000161831;contig=MDC000413.348 + MDC000413.348 No
MD00G052170 mdo transcript=eq;prot=eq;pid=MDP0000269381;tid=MDP0000269381;contig=MDC002151.478 + MDC002151.478 No
MD00G231370 mdo transcript=eq;prot=eq;pid=MDP0000490903;tid=MDP0000490903;contig=MDC010041.442 - MDC010041.442 No
MD07G010530 mdo transcript=eq;prot=eq;pid=MDP0000269390;tid=MDP0000269390;contig=MDC002151.477 + 7 No
ME07463G00030 mes PACid=17986152;RNAname=cassava4.1_028463m;GeneName=cassava4.1_028463m.g;transcript=ne;prot=eq + scaffold07463 No
MT2G087120 mtr Pentatricopeptide repeat-containing protein At1g05750, chloroplastic (AHRD V1 ***- Q9MA50); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat transcript=eq;prot=eq;pid=Medtr2g087120.1; - 2 No
OS02G53050 osa tetratricopeptide%2Dlike helical, putative, expressed transcript=eq;prot=eq; - 2 No
OSINDICA_02G51390 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC040241; - Chr02 No
PT01G21770 ptr PACid=17310589;name=POPTR_0001s22530;alias=pt038606m,fgenesh4_pm.C_LG_I000597; transcript=eq;prot=eq;protein_id=17310589; - scaffold_1 No
RC30055G01000 rco name=30055.m001630;gene=30055.t000100;note=30055.t000100;transcript=eq;prot=eq + 30055 No
SB04G034420 sbi 4 prot=eq;pid=5039079;tid=5039079 - chr_4 No
TC00G005600 tca RNAname=Tc00_t005600;GeneName=Tc00_g005600;transcript=eq;prot=eq + Tc00 No
VV06G12680 vvi name=GSVIVG01037562001; transcript=eq;prot=eq;name=GSVIVG01037562001;pid=GSVIVG01037562001;tid=GSVIVT01037562001; + chr6 No
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