Sub-family  

Parent family
HOM000288
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO008200 has 22 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G20190 aly name=fgenesh2_kg.8__1384__AT5G54860.1;pid=495568;prot=eq;tid=495568 + scaffold_8 No
AT5G54860 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G64890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 5 No
BD2G08527 bdi pid=Bradi2g08527.1;tid=Bradi2g08527.1;GeneName=Bradi2g08527;transcript=eq;prot=eq - Bd2 No
CP00097G00290 cpa name=evm.TU.supercontig_97.29;pid=evm.TU.supercontig_97.29;prot=eq;transcript=eq - supercontig_97 No
CR14G01600 cre name=OVA_fgenesh2_pg.C_scaffold_43000100;pid=206012;prot=eq;tid=206017;transcript=eq + chromosome_14 No
FV3G24580 fve Major facilitator superfamily domain-containing protein 6-like protein A (probable) transcript=eq;prot=eq;pid=gene03163 + LG3 No
GM08G42640 gma 08 pid=16273604;transcript=eq;prot=eq;name=Glyma08g42640.1 + Gm08 No
GM18G11640 gma 18 pid=16308596;transcript=eq;prot=eq;name=Glyma18g11640.1 - Gm18 No
LJ6G005880 lja partial;prot=eq;transcript=eq;scaffold=LjT41B02;name=chr6.LjT41B02.30.nd + chr6 No
MD05G003120 mdo transcript=eq;prot=eq;pid=MDP0000302003;tid=MDP0000302003;contig=MDC016338.101 + 5 No
ME01778G00100 mes PACid=17960594;RNAname=cassava4.1_032050m;GeneName=cassava4.1_032050m.g;transcript=eq;prot=eq - scaffold01778 No
MT3G051190 mtr AT5g54860/MBG8_12 (AHRD V1 ***- Q8RWQ5_ARATH); contains Interpro domain(s) IPR004324 Biopterin transport-related protein BT1 transcript=eq;prot=eq;pid=Medtr3g051190.1; + 3 No
OS01G14100 osa BT1 family protein, putative, expressed transcript=eq;prot=eq; - 1 No
OSINDICA_01G13540 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000964; - Chr01 No
PT11G13280 ptr PACid=17304964;name=POPTR_0011s14040;alias=pt013987m,eugene3.00111128; transcript=eq;prot=eq;protein_id=17304964; + scaffold_11 No
PT11G13290 ptr PACid=17330268;name=POPTR_0011s14050;alias=pt014014m; transcript=eq;prot=eq;protein_id=17330268; + scaffold_11 No
RC29666G00330 rco name=29666.m001458;gene=29666.t000034;note=29666.t000034;transcript=eq;prot=eq - 29666 No
SB03G003850 sbi 3 prot=eq;pid=5052556;tid=5052556 + chr_3 No
SM00003G03860 smo proteinId=405109;transcriptId=405109;name=fgenesh2_pg.C_scaffold_3000332;transcript=eq;prot=eq - scaffold_3 No
TC07G004120 tca RNAname=Tc07_t004120;GeneName=Tc07_g004120;transcript=eq;prot=eq - Tc07 No
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