Sub-family 
- Id
- ORTHO008134
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM001434
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (2 genes)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (1 gene)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family ORTHO008134 has 22 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO008134
Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL7G21090 | aly | name=fgenesh2_kg.7__2152__AT4G21585.1;pid=492719;prot=eq;tid=492719 | - | scaffold_7 | No | |
| AT4G21585 | ath | Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.;endonuclease 4 | transcript=eq;prot=eq; | + | 4 | No |
| BD2G01980 | bdi | endonuclease activity (Blast2GO) | pid=Bradi2g01980.1;tid=Bradi2g01980.1;GeneName=Bradi2g01980;transcript=eq;prot=eq | + | Bd2 | No |
| BD5G24430 | bdi | endonuclease activity (Blast2GO) | pid=Bradi5g24430.1;tid=Bradi5g24430.1;GeneName=Bradi5g24430;transcript=eq;prot=eq | - | Bd5 | No |
| CP00027G01050 | cpa | name=evm.TU.supercontig_27.106;pid=evm.TU.supercontig_27.106;prot=eq;transcript=eq | - | supercontig_27 | No | |
| FV3G06640 | fve | Nuclease PA3 (probable) | transcript=eq;prot=eq;pid=gene30472 | - | LG3 | No |
| GM08G06270 | gma | 08 | pid=16270166;transcript=eq;prot=eq;name=Glyma08g06270.1 | - | Gm08 | No |
| MD00G031300 | mdo | transcript=eq;prot=eq;pid=MDP0000146734;tid=MDP0000146734;contig=MDC001325.98 | - | MDC001325.98 | No | |
| MD05G003610 | mdo | transcript=eq;prot=eq;pid=MDP0000153463;tid=MDP0000153463;contig=MDC021300.48 | + | 5 | No | |
| ME08301G00080 | mes | PACid=17970141;RNAname=cassava4.1_012585m;GeneName=cassava4.1_012585m.g;transcript=eq;prot=eq | + | scaffold08301 | No | |
| MT4G090610 | mtr | Nuclease S1 (AHRD V1 ***- P24021); contains Interpro domain(s) IPR003154 S1/P1 nuclease | transcript=eq;prot=eq;pid=Medtr4g090610.1; | - | 4 | No |
| OS01G03730 | osa | nuclease PA3, putative, expressed | transcript=eq;prot=eq; | + | 1 | No |
| OSINDICA_04G47940 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC019057; | + | Chr04 | No |
| PP00211G00540 | ppa | NULL | name=gw1.211.34.1,pid=5363,prot=eq,tid=5363 | - | scaffold_211 | No |
| PT11G04230 | ptr | PACid=17305309;name=POPTR_0011s04420;alias=pt014366m,estExt_fgenesh4_pg.C_LG_XI0310; | transcript=eq;prot=eq;protein_id=17305309; | + | scaffold_11 | No |
| RC29917G00270 | rco | name=29917.m001958;gene=29917.t000027;note=29917.t000027;transcript=eq;prot=eq | - | 29917 | No | |
| SB06G031020 | sbi | 6 | prot=eq;pid=5058021;tid=5058021 | + | chr_6 | No |
| SM00006G05570 | smo | proteinId=84536;transcriptId=84536;name=e_gw1.6.334.1;transcript=eq;prot=eq | - | scaffold_6 | No | |
| TC06G016640 | tca | RNAname=Tc06_t016640;GeneName=Tc06_g016640;transcript=eq;prot=eq | - | Tc06 | No | |
| VV00G14400 | vvi | name=GSVIVG01005842001; | transcript=eq;prot=eq;name=GSVIVG01005842001;pid=GSVIVG01005842001;tid=GSVIVT01005842001; | - | chrUn | No |