Sub-family  

Parent family
HOM001434
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO008134 has 22 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G21090 aly name=fgenesh2_kg.7__2152__AT4G21585.1;pid=492719;prot=eq;tid=492719 - scaffold_7 No
AT4G21585 ath Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.;endonuclease 4 transcript=eq;prot=eq; + 4 No
BD2G01980 bdi endonuclease activity (Blast2GO) pid=Bradi2g01980.1;tid=Bradi2g01980.1;GeneName=Bradi2g01980;transcript=eq;prot=eq + Bd2 No
BD5G24430 bdi endonuclease activity (Blast2GO) pid=Bradi5g24430.1;tid=Bradi5g24430.1;GeneName=Bradi5g24430;transcript=eq;prot=eq - Bd5 No
CP00027G01050 cpa name=evm.TU.supercontig_27.106;pid=evm.TU.supercontig_27.106;prot=eq;transcript=eq - supercontig_27 No
FV3G06640 fve Nuclease PA3 (probable) transcript=eq;prot=eq;pid=gene30472 - LG3 No
GM08G06270 gma 08 pid=16270166;transcript=eq;prot=eq;name=Glyma08g06270.1 - Gm08 No
MD00G031300 mdo transcript=eq;prot=eq;pid=MDP0000146734;tid=MDP0000146734;contig=MDC001325.98 - MDC001325.98 No
MD05G003610 mdo transcript=eq;prot=eq;pid=MDP0000153463;tid=MDP0000153463;contig=MDC021300.48 + 5 No
ME08301G00080 mes PACid=17970141;RNAname=cassava4.1_012585m;GeneName=cassava4.1_012585m.g;transcript=eq;prot=eq + scaffold08301 No
MT4G090610 mtr Nuclease S1 (AHRD V1 ***- P24021); contains Interpro domain(s) IPR003154 S1/P1 nuclease transcript=eq;prot=eq;pid=Medtr4g090610.1; - 4 No
OS01G03730 osa nuclease PA3, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_04G47940 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC019057; + Chr04 No
PP00211G00540 ppa NULL name=gw1.211.34.1,pid=5363,prot=eq,tid=5363 - scaffold_211 No
PT11G04230 ptr PACid=17305309;name=POPTR_0011s04420;alias=pt014366m,estExt_fgenesh4_pg.C_LG_XI0310; transcript=eq;prot=eq;protein_id=17305309; + scaffold_11 No
RC29917G00270 rco name=29917.m001958;gene=29917.t000027;note=29917.t000027;transcript=eq;prot=eq - 29917 No
SB06G031020 sbi 6 prot=eq;pid=5058021;tid=5058021 + chr_6 No
SM00006G05570 smo proteinId=84536;transcriptId=84536;name=e_gw1.6.334.1;transcript=eq;prot=eq - scaffold_6 No
TC06G016640 tca RNAname=Tc06_t016640;GeneName=Tc06_g016640;transcript=eq;prot=eq - Tc06 No
VV00G14400 vvi name=GSVIVG01005842001; transcript=eq;prot=eq;name=GSVIVG01005842001;pid=GSVIVG01005842001;tid=GSVIVT01005842001; - chrUn No
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