Sub-family  

Parent family
HOM000171
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO008129 has 22 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G17510 aly name=scaffold_701866.1;pid=914124;prot=eq;tid=945637 - scaffold_7 No
AT4G24630 ath DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink).;DHHC-type zinc finger family protein transcript=eq;prot=eq; + 4 No
BD2G24190 bdi protein-cysteine S-palmitoleyltransferase activity (Blast2GO) pid=Bradi2g24190.1;tid=Bradi2g24190.1;GeneName=Bradi2g24190;transcript=eq;prot=eq - Bd2 No
CP00049G00870 cpa name=evm.TU.supercontig_49.87;pid=evm.TU.supercontig_49.87;prot=eq;transcript=eq + supercontig_49 No
FV2G21210 fve Probable S-acyltransferase At4g24630 (similar to) transcript=eq;prot=eq;pid=gene27601 + LG2 No
GM02G08790 gma 02 pid=16247442;transcript=eq;prot=eq;name=Glyma02g08790.1 + Gm02 No
GM10G36730 gma 10 pid=16281214;transcript=eq;prot=eq;name=Glyma10g36730.1 + Gm10 No
GM16G27910 gma 16 pid=16303136;transcript=eq;prot=eq;name=Glyma16g27910.1 + Gm16 No
GM20G30860 gma 20 pid=16317427;transcript=eq;prot=eq;name=Glyma20g30860.1 - Gm20 No
LJ5G024330 lja prot=eq;transcript=eq;scaffold=CM0052;name=chr5.CM0052.310.nd - chr5 No
MD10G002210 mdo transcript=eq;prot=eq;pid=MDP0000135639;tid=MDP0000135639;contig=MDC001708.398 - 10 No
ME07519G00560 mes PACid=17960087;RNAname=cassava4.1_008306m;GeneName=cassava4.1_008306m.g;transcript=eq;prot=eq + scaffold07519 No
MT1G098390 mtr Palmitoyltransferase SWF1 (AHRD V1 *-*- Q5A861); contains Interpro domain(s) IPR001594 Zinc finger, DHHC-type transcript=eq;prot=eq;pid=Medtr1g098390.1; + 1 No
OS05G36090 osa zinc finger DHHC domain%2Dcontaining protein, putative, expressed transcript=eq;prot=eq; + 5 No
OSINDICA_05G32350 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC021343; + Chr05 No
PT02G06420 ptr PACid=17335922;name=POPTR_0002s06610;alias=pt020620m; transcript=eq;prot=eq;protein_id=17335922; + scaffold_2 No
PT05G20570 ptr PACid=17344180;name=POPTR_0005s21710;alias=pt032954m,eugene3.00051021; transcript=eq;prot=eq;protein_id=17344180; - scaffold_5 No
RC29863G00300 rco name=29863.m001070;gene=29863.t000030;note=29863.t000030;transcript=eq;prot=eq - 29863 No
SB09G021530 sbi 9 prot=eq;pid=5060564;tid=5060564 + chr_9 No
TC00G082970 tca RNAname=Tc00_t082970;GeneName=Tc00_g082970;transcript=eq;prot=eq - Tc00 No
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