Sub-family  

Parent family
HOM000032
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO008012 has 22 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G02750 aly name=Al_scaffold_0006_259;pid=860750;prot=eq;tid=892263 - scaffold_6 No
AT5G03530 ath Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.;RAB GTPase homolog C2A transcript=eq;prot=eq; - 5 No
BD1G75340 bdi GTPase activity (Blast2GO) pid=Bradi1g75340.1;tid=Bradi1g75340.1;GeneName=Bradi1g75340;transcript=eq;prot=eq - Bd1 No
CP00005G01550 cpa name=evm.TU.supercontig_5.155;pid=evm.TU.supercontig_5.155;prot=eq;transcript=eq + supercontig_5 No
FV6G50030 fve GTP-binding protein yptV3 (similar to) transcript=eq;prot=eq;pid=gene09802 - LG6 No
GM03G34330 gma 03 pid=16253296;transcript=eq;prot=eq;name=Glyma03g34330.1 - Gm03 No
GM10G06780 gma 10 pid=16278814;transcript=eq;prot=eq;name=Glyma10g06780.1 - Gm10 No
GM13G20970 gma 13 pid=16291025;transcript=eq;prot=eq;name=Glyma13g20970.1 - Gm13 No
GM19G37020 gma 19 pid=16314037;transcript=eq;prot=eq;name=Glyma19g37020.1 - Gm19 No
LJ1G050070 lja prot=eq;transcript=eq;scaffold=CM0012;name=chr1.CM0012.470.nc - chr1 No
LJ5G009080 lja prot=eq;transcript=eq;scaffold=LjT09C21;name=chr5.LjT09C21.90.nd + chr5 No
MD00G063680 mdo transcript=eq;prot=eq;pid=MDP0000269923;tid=MDP0000269923;contig=MDC002661.254 - MDC002661.254 No
MD00G434090 mdo transcript=eq;prot=eq;pid=MDP0000734554;tid=MDP0000734554;contig=MDC019859.114 - MDC019859.114 No
ME03002G00050 mes PACid=17972480;RNAname=cassava4.1_015990m;GeneName=cassava4.1_015990m.g;transcript=eq;prot=eq - scaffold03002 No
OS03G05280 osa ras%2Drelated protein, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G04430 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005175; + Chr03 No
PT16G10260 ptr PACid=17345643;name=POPTR_0016s10830;alias=pt003513m,Pt-ALPHA.3,estExt_fgenesh4_pm.C_LG_XVI0347; transcript=eq;prot=eq;protein_id=17345643; - scaffold_16 No
RC30078G00410 rco name=30078.m002250;gene=30078.t000043;note=30078.t000043;transcript=eq;prot=eq + 30078 No
SB01G047150 sbi 1 prot=eq;pid=5030492;tid=5030492 - chr_1 No
TC00G055990 tca RNAname=Tc00_t055990;GeneName=Tc00_g055990;transcript=eq;prot=eq - Tc00 No
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