Sub-family  

Parent family
HOM000789
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO007993 has 22 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G28580 aly name=Al_scaffold_0005_2722;pid=867243;prot=eq;tid=898756 - scaffold_5 No
AT3G58060 ath Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).;Cation efflux family protein transcript=eq;prot=eq; - 3 No
BD1G68950 bdi iron ion transmembrane transporter activity (Blast2GO) pid=Bradi1g68950.1;tid=Bradi1g68950.1;GeneName=Bradi1g68950;transcript=eq;prot=eq + Bd1 No
CP00119G00890 cpa name=evm.TU.supercontig_119.89;pid=evm.TU.supercontig_119.89;prot=eq;transcript=eq + supercontig_119 No
FV3G36180 fve Putative metal tolerance protein C3 (AtMTPc3) (similar to) transcript=eq;prot=eq;pid=gene24732 + LG3 No
GM18G05690 gma 18 pid=16308023;transcript=eq;prot=eq;name=Glyma18g05690.1 + Gm18 No
MD00G158040 mdo transcript=eq;prot=eq;pid=MDP0000283321;tid=MDP0000283321;contig=MDC006786.352 - MDC006786.352 No
ME00341G00110 mes PACid=17960729;RNAname=cassava4.1_008915m;GeneName=cassava4.1_008915m.g;transcript=eq;prot=eq + scaffold00341 No
ME08542G00080 mes PACid=17994113;RNAname=cassava4.1_008827m;GeneName=cassava4.1_008827m.g;transcript=eq;prot=eq - scaffold08542 No
MT3G062610 mtr Metal tolerance protein (Fragment) (AHRD V1 ***- B9GLJ7_POPTR); contains Interpro domain(s) IPR002524 Cation efflux protein transcript=eq;prot=eq;pid=Medtr3g062610.1; - 3 No
OS03G12530 osa cation efflux family protein, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G10970 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005678; + Chr03 No
PT01G04560 ptr PACid=17337197;name=POPTR_0001s04750;alias=pt038618m; transcript=eq;prot=eq;protein_id=17337197; - scaffold_1 No
PT03G20590 ptr PACid=17339229;name=POPTR_0003s21540;alias=pt023387m,fgenesh4_pm.C_LG_III000766,PtrMTP8.1; transcript=eq;prot=eq;protein_id=17339229; - scaffold_3 No
RC29773G00050 rco name=29773.m000281;gene=29773.t000005;note=29773.t000005;transcript=eq;prot=eq - 29773 No
SB01G041820 sbi 1 prot=eq;pid=5030237;tid=5030237 + chr_1 No
SM00018G00460 smo proteinId=96683;transcriptId=96683;name=e_gw1.18.643.1;transcript=eq;prot=eq + scaffold_18 No
SM00018G00500 smo proteinId=96962;transcriptId=96962;name=e_gw1.18.155.1;transcript=eq;prot=eq - scaffold_18 No
TC00G045810 tca RNAname=Tc00_t045810;GeneName=Tc00_g045810;transcript=eq;prot=eq + Tc00 No
VV06G06990 vvi name=GSVIVG01025383001; transcript=eq;prot=eq;name=GSVIVG01025383001;pid=GSVIVG01025383001;tid=GSVIVT01025383001; - chr6 No
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