Sub-family  

Parent family
HOM000072
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007973 has 22 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G20160 aly name=scaffold_502097.1;pid=906393;prot=eq;tid=937906 - scaffold_5 No
AT3G50660 ath Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.;Cytochrome P450 superfamily protein transcript=eq;prot=eq; - 3 No
BD1G69040 bdi pid=Bradi1g69040.1;tid=Bradi1g69040.1;GeneName=Bradi1g69040;transcript=eq;prot=eq + Bd1 No
CP00006G01010 cpa name=evm.TU.supercontig_6.102;pid=evm.TU.supercontig_6.102;prot=eq;transcript=eq + supercontig_6 No
FV1G15740 fve Cytochrome P450 90B1 (Dwarf4) (putative) transcript=eq;prot=eq;pid=gene14783 - LG1 No
GM01G38180 gma 01 pid=16245563;transcript=eq;prot=eq;name=Glyma01g38180.1 + Gm01 No
GM02G06410 gma 02 pid=16247178;transcript=eq;prot=eq;name=Glyma02g06410.1 - Gm02 No
GM11G07240 gma 11 pid=16282982;transcript=eq;prot=eq;name=Glyma11g07240.1 + Gm11 No
LJ4G012030 lja partial;prot=eq;transcript=eq;scaffold=CM0165;name=chr4.CM0165.560.nd - chr4 No
MD15G019120 mdo transcript=eq;prot=eq;pid=MDP0000498540;tid=MDP0000498540;contig=MDC010545.223 - 15 No
ME06512G00090 mes PACid=17966393;RNAname=cassava4.1_006368m;GeneName=cassava4.1_006368m.g;transcript=eq;prot=eq + scaffold06512 No
MT5G020020 mtr Cytochrome P450 enzyme (AHRD V1 ***- A4PBE7_PEA); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I transcript=eq;prot=eq;pid=Medtr5g020020.1; + 5 No
MT8G077810 mtr Cytochrome P450 enzyme (AHRD V1 ***- A4PBE7_PEA); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I transcript=eq;prot=eq;pid=Medtr8g077810.1; - 8 No
OS03G12660 osa cytochrome P450, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G11120 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005688; + Chr03 No
PT05G12360 ptr PACid=17323375;name=POPTR_0005s12550;alias=pt032964m; transcript=eq;prot=eq;protein_id=17323375; - scaffold_5 No
PT07G12160 ptr PACid=17329842;name=POPTR_0007s12730;alias=pt025381m; transcript=eq;prot=eq;protein_id=17329842; + scaffold_7 No
RC29634G01040 rco name=29634.m002158;gene=29634.t000104;note=29634.t000104;transcript=eq;prot=eq + 29634 No
SB01G041900 sbi 1 prot=eq;pid=5049864;tid=5049864 + chr_1 No
TC01G003310 tca RNAname=Tc01_t003310;GeneName=Tc01_g003310;transcript=eq;prot=eq - Tc01 No
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