Sub-family  

Parent family
HOM004901
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007935 has 22 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G30090 aly name=fgenesh2_kg.4__2425__AT2G42700.1;pid=483365;prot=eq;tid=483365 + scaffold_4 No
AT2G42700 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619). transcript=eq;prot=eq; + 2 No
BD4G24237 bdi pid=Bradi4g24237.1;tid=Bradi4g24237.1;GeneName=Bradi4g24237;transcript=eq;prot=eq + Bd4 No
CP00052G01510 cpa name=evm.TU.supercontig_52.152;pid=evm.TU.supercontig_52.152;prot=eq;transcript=eq - supercontig_52 No
CP00052G01520 cpa name=evm.TU.supercontig_52.153;pid=evm.TU.supercontig_52.153;prot=eq;transcript=eq - supercontig_52 No
FV6G23240 fve Sec1 family domain-containing protein 2 (probable) transcript=eq;prot=eq;pid=gene15773 + LG6 No
GM06G42880 gma 06 pid=16264986;transcript=eq;prot=eq;name=Glyma06g42880.1 - Gm06 No
GM12G15440 gma 12 pid=16287565;transcript=eq;prot=eq;name=Glyma12g15440.1 + Gm12 No
LJ0G079790 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_026646;name=LjSGA_026646.1 - LjSGA_026646 No
MD09G023100 mdo transcript=eq;prot=eq;pid=MDP0000297920;tid=MDP0000297920;contig=MDC012675.488 - 9 No
ME07708G00100 mes PACid=17962318;RNAname=cassava4.1_001539m;GeneName=cassava4.1_001539m.g;transcript=eq;prot=eq + scaffold07708 No
MT4G080110 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR001619 Sec1-like protein transcript=eq;prot=eq;pid=Medtr4g080110.1; + 4 No
OS11G06810 osa expressed protein transcript=eq;prot=eq; + 11 No
OSINDICA_11G05430 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC034286; + Chr11 No
PP00203G00620 ppa NULL name=e_gw1.203.4.1,pid=143481,prot=eq,tid=143481 + scaffold_203 No
PT14G13770 ptr PACid=17309675;name=POPTR_0014s13960;alias=pt035092m,estExt_Genewise1_v1.C_LG_XIV2984; transcript=eq;prot=eq;protein_id=17309675; + scaffold_14 No
RC30099G00810 rco name=30099.m001703;gene=30099.t000082;note=30099.t000082;transcript=eq;prot=eq + 30099 No
SB09G030030 sbi 9 prot=eq;pid=5061053;tid=5061053 + chr_9 No
SM00039G00330 smo proteinId=110150;transcriptId=110150;name=e_gw1.39.329.1;transcript=eq;prot=eq - scaffold_39 No
TC00G040670 tca RNAname=Tc00_t040670;GeneName=Tc00_g040670;transcript=eq;prot=eq - Tc00 No
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