Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO007929 has 22 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G27340 aly name=Al_scaffold_0004_2653;pid=870490;prot=eq;tid=902003 + scaffold_4 No
AT2G40460 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 7555 Blast hits to 7238 proteins in 1401 species: Archae - 0; Bacteria - 3710; Metazoa - 634; Fungi - 431; Plants - 2228; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 2 No
BD2G30380 bdi proton-dependent oligopeptide secondary active transmembrane transporter activity (Blast2GO) pid=Bradi2g30380.1;tid=Bradi2g30380.1;GeneName=Bradi2g30380;transcript=eq;prot=eq + Bd2 No
CP00019G00960 cpa name=evm.TU.supercontig_19.96;pid=evm.TU.supercontig_19.96;prot=eq;transcript=eq - supercontig_19 No
FV7G30680 fve Peptide transporter PTR3-A (AtPTR3) (probable) transcript=eq;prot=eq;pid=gene21308 + LG7 No
GM02G42740 gma 02 pid=16249945;transcript=eq;prot=eq;name=Glyma02g42740.1 - Gm02 No
GM04G39870 gma 04 pid=16257328;transcript=eq;prot=eq;name=Glyma04g39870.1 - Gm04 No
GM06G15020 gma 06 pid=16263005;transcript=eq;prot=eq;name=Glyma06g15020.1 + Gm06 No
GM11G35890 gma 11 pid=16285529;transcript=eq;prot=eq;name=Glyma11g35890.1 + Gm11 No
GM18G02510 gma 18 pid=16307704;transcript=eq;prot=eq;name=Glyma18g02510.1 - Gm18 No
LJ0G413360 lja prot=eq;transcript=eq;scaffold=LjB01J01;name=LjB01J01.120.nc + chr0 No
LJ1G014000 lja prot=eq;transcript=eq;scaffold=CM0248;name=chr1.CM0248.410.nc + chr1 No
MD00G408070 mdo transcript=eq;prot=eq;pid=MDP0000457243;tid=MDP0000457243;contig=MDC018571.138 + MDC018571.138 No
MD04G002630 mdo transcript=eq;prot=eq;pid=MDP0000213770;tid=MDP0000213770;contig=MDC016152.155 + 4 No
ME00926G00130 mes PACid=17960161;RNAname=cassava4.1_004356m;GeneName=cassava4.1_004356m.g;transcript=eq;prot=eq - scaffold00926 No
ME10689G00150 mes PACid=17983245;RNAname=cassava4.1_004197m;GeneName=cassava4.1_004197m.g;transcript=eq;prot=eq - scaffold10689 No
MT3G072300 mtr Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region transcript=eq;prot=eq;pid=Medtr3g072300.1; + 3 No
PT19G07200 ptr PACid=17313164;name=POPTR_0019s08340;alias=pt009797m,gw1.XIX.1560.1; transcript=eq;prot=eq;protein_id=17313164; - scaffold_19 No
RC29729G00650 rco name=29729.m002332;gene=29729.t000065;note=29729.t000065;transcript=eq;prot=eq + 29729 No
SB09G016180 sbi 9 prot=eq;pid=5046310;tid=5046310 - chr_9 No
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