Sub-family  

Parent family
HOM001264
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007903 has 22 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G18850 aly name=scaffold_401936.1;pid=902435;prot=eq;tid=933948 + scaffold_4 No
AT2G33610 ath Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.;switch subunit 3 transcript=eq;prot=eq; + 2 No
BD3G06870 bdi MYB-related transcription factor pid=Bradi3g06870.1;tid=Bradi3g06870.1;GeneName=Bradi3g06870;Name=BdMYBR42;transcript=eq;prot=eq + Bd3 No
CP00026G00130 cpa name=evm.TU.supercontig_26.13;pid=evm.TU.supercontig_26.13;prot=eq;transcript=eq + supercontig_26 No
FV3G00790 fve SWI/SNF complex subunit SWI3B (AtSWI3B) (similar to) transcript=eq;prot=eq;pid=gene19598 - LG3 No
GM04G01600 gma 04 pid=16254486;transcript=eq;prot=eq;name=Glyma04g01600.1 + Gm04 No
GM06G01680 gma 06 pid=16261364;transcript=eq;prot=eq;name=Glyma06g01680.1 + Gm06 No
LJ1G034650 lja prot=eq;transcript=eq;scaffold=CM0150;name=chr1.CM0150.300.nc - chr1 No
MD00G272520 mdo transcript=eq;prot=eq;pid=MDP0000204573;tid=MDP0000204573;contig=MDC011652.271 - MDC011652.271 No
MD05G001640 mdo transcript=eq;prot=eq;pid=MDP0000297962;tid=MDP0000297962;contig=MDC013233.431 + 5 No
MD10G026390 mdo transcript=eq;prot=eq;pid=MDP0000289511;tid=MDP0000289511;contig=MDC011427.205 - 10 No
ME02943G01290 mes PACid=17990107;RNAname=cassava4.1_007232m;GeneName=cassava4.1_007232m.g;transcript=eq;prot=eq - scaffold02943 No
MT3G116120 mtr SWI/SNF complex subunit SMARCC2 (AHRD V1 *-*- Q8TAQ2); contains Interpro domain(s) IPR007526 SWIRM transcript=eq;prot=eq;pid=Medtr3g116120.1; - 3 No
MT5G085170 mtr SWI/SNF complex subunit SMARCC1 (AHRD V1 *-*- P97496); contains Interpro domain(s) IPR007526 SWIRM transcript=eq;prot=eq;pid=Medtr5g085170.1; + 5 No
OS02G10060 osa SWIRM domain containing protein, expressed transcript=eq;prot=eq; + 2 No
OSINDICA_02G09530 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC012841; + Chr02 No
PT02G00430 ptr PACid=17309843;name=POPTR_0002s00620;alias=pt020355m,gw1.II.2161.1,Pt-SWI3.1,part of CHB903 (eugene3.00020042); transcript=eq;prot=eq;protein_id=17309843; + scaffold_2 No
RC30093G00030 rco name=30093.m000352;gene=30093.t000003;note=30093.t000003;transcript=eq;prot=eq - 30093 No
SB04G006410 sbi 4 prot=eq;pid=5054836;tid=5054836 + chr_4 No
TC08G008410 tca RNAname=Tc08_t008410;GeneName=Tc08_g008410;transcript=eq;prot=eq + Tc08 No
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