Sub-family  

Parent family
HOM001823
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007890 has 22 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G12280 aly name=fgenesh2_kg.4__780__AT2G27830.1;pid=481720;prot=eq;tid=481720 - scaffold_4 No
AT2G27830 ath unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; + 2 No
BD5G08990 bdi pid=Bradi5g08990.1;tid=Bradi5g08990.1;GeneName=Bradi5g08990;transcript=eq;prot=eq - Bd5 No
CP00047G00620 cpa name=evm.TU.supercontig_47.62;pid=evm.TU.supercontig_47.62;prot=eq;transcript=eq - supercontig_47 No
FV3G16290 fve hypothetical protein transcript=eq;prot=eq;pid=gene14383 + LG3 No
GM11G19450 gma 11 pid=16284341;transcript=eq;prot=eq;name=Glyma11g19450.1 + Gm11 No
GM12G09010 gma 12 pid=16286923;transcript=eq;prot=eq;name=Glyma12g09010.1 - Gm12 No
LJ3G029840 lja prot=eq;transcript=eq;scaffold=CM0396;name=chr3.CM0396.70.nc + chr3 No
MD00G190860 mdo transcript=eq;prot=eq;pid=MDP0000124065;tid=MDP0000124065;contig=MDC008191.272 - MDC008191.272 No
MD11G011630 mdo transcript=eq;prot=eq;pid=MDP0000124063;tid=MDP0000124063;contig=MDC008191.271 + 11 No
ME03569G00080 mes PACid=17991756;RNAname=cassava4.1_016580m;GeneName=cassava4.1_016580m.g;transcript=eq;prot=eq - scaffold03569 No
ME05859G00260 mes PACid=17973480;RNAname=cassava4.1_016547m;GeneName=cassava4.1_016547m.g;transcript=eq;prot=eq - scaffold05859 No
MT4G055420 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr4g055420.1; + 4 No
OS02G32580 osa expressed protein transcript=eq;prot=eq; - 2 No
OSINDICA_02G30900 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC014134; - Chr02 No
PT04G18860 ptr PACid=17332384;name=POPTR_0004s20000;alias=pt007222m,estExt_fgenesh4_pm.C_660017; transcript=eq;prot=eq;protein_id=17332384; + scaffold_4 No
PT09G14950 ptr PACid=17309957;name=POPTR_0009s15140;alias=pt005165m,grail3.0001016801; transcript=eq;prot=eq;protein_id=17309957; + scaffold_9 No
RC29991G00250 rco name=29991.m000644;gene=29991.t000026;note=29991.t000026;transcript=eq;prot=eq - 29991 No
SB04G021480 sbi 4 prot=eq;pid=5055188;tid=5055188 - chr_4 No
SB06G015290 sbi 6 prot=eq;pid=5057152;tid=5057152 - chr_6 No
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