Sub-family  

Parent family
HOM001158
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007671 has 22 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G28180 aly name=fgenesh2_kg.1__2857__AT1G24450.1;pid=472903;prot=eq;tid=472903 - scaffold_1 No
AT1G24450 ath NUCLEAR FUSION DEFECTIVE 2 (NFD2); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); Has 2124 Blast hits to 2124 proteins in 820 species: Archae - 3; Bacteria - 1583; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).;Ribonuclease III family protein transcript=eq;prot=eq; + 1 No
BD1G01120 bdi ribonuclease III activity (Blast2GO) pid=Bradi1g01120.1;tid=Bradi1g01120.1;GeneName=Bradi1g01120;transcript=eq;prot=eq - Bd1 No
CP00124G00280 cpa name=evm.TU.supercontig_124.28;pid=evm.TU.supercontig_124.28;prot=eq;transcript=eq - supercontig_124 No
FV5G05940 fve Ribonuclease 3 (RNase III) (probable) transcript=eq;prot=eq;pid=gene32161 - LG5 No
GM17G09900 gma 17 pid=16305027;transcript=eq;prot=eq;name=Glyma17g09900.1 + Gm17 No
LJ0G450250 lja prot=eq;transcript=eq;scaffold=LjT28B05;name=LjT28B05.30.nc + chr0 No
MD00G355060 mdo transcript=eq;prot=eq;pid=MDP0000128896;tid=MDP0000128896;contig=MDC015902.146 - MDC015902.146 No
MD14G018150 mdo transcript=eq;prot=eq;pid=MDP0000147398;tid=MDP0000147398;contig=MDC001735.269 + 14 No
ME12794G01240 mes PACid=17974005;RNAname=cassava4.1_017027m;GeneName=cassava4.1_017027m.g;transcript=eq;prot=eq + scaffold12794 No
MT4G106640 mtr Ribonuclease 3 (AHRD V1 ***- O67082); contains Interpro domain(s) IPR000999 Ribonuclease III transcript=eq;prot=eq;pid=Medtr4g106640.1; + 4 No
MT4G107060 mtr Ribonuclease 3 (AHRD V1 ***- O67082); contains Interpro domain(s) IPR000999 Ribonuclease III transcript=eq;prot=eq;pid=Medtr4g107060.1; + 4 No
OS03G63740 osa NFD2, putative, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G60810 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009026; - Chr03 No
PT12G07410 ptr PACid=17330647;name=POPTR_0012s07980;alias=pt016370m,estExt_fgenesh4_pg.C_LG_XII0765; transcript=eq;prot=eq;protein_id=17330647; - scaffold_12 No
PT15G07570 ptr PACid=17302405;name=POPTR_0015s08520;alias=pt001192m,gw1.XV.1442.1; transcript=eq;prot=eq;protein_id=17302405; - scaffold_15 No
RC30147G06520 rco name=30147.m013979;gene=30147.t000250;note=30147.t000250;transcript=eq;prot=eq + 30147 No
SB01G000740 sbi 1 prot=eq;pid=5027943;tid=5027943 + chr_1 No
SM00011G01170 smo proteinId=90770;transcriptId=90770;name=e_gw1.11.606.1;transcript=eq;prot=eq - scaffold_11 No
TC03G000810 tca RNAname=Tc03_t000810;GeneName=Tc03_g000810;transcript=eq;prot=eq - Tc03 No
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