Sub-family 
- Id
- ORTHO007657
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000152
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family ORTHO007657 has 22 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO007657
Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G22250 | aly | name=fgenesh2_kg.1__2292__AT1G20980.1;pid=472338;prot=eq;tid=472338 | + | scaffold_1 | No | |
| AL2G25530 | aly | name=scaffold_202615.1;pid=895541;prot=eq;tid=927054 | + | scaffold_2 | No | |
| AT1G20980 | ath | Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture.;squamosa promoter binding protein-like 14 | transcript=eq;prot=eq; | + | 1 | No |
| AT1G76580 | ath | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 4275 Blast hits to 1172 proteins in 134 species: Archae - 0; Bacteria - 31; Metazoa - 161; Fungi - 128; Plants - 962; Viruses - 0; Other Eukaryotes - 2993 (source: NCBI BLink).;Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | transcript=eq;prot=eq; | + | 1 | No |
| BD3G40240 | bdi | pid=Bradi3g40240.1;tid=Bradi3g40240.1;GeneName=Bradi3g40240;transcript=eq;prot=eq | + | Bd3 | No | |
| CP00036G01020 | cpa | name=evm.TU.supercontig_36.102;pid=evm.TU.supercontig_36.102;prot=eq;transcript=eq | - | supercontig_36 | No | |
| FV5G28030 | fve | Squamosa promoter-binding-like protein 14 (putative) | transcript=eq;prot=eq;pid=gene29149 | - | LG5 | No |
| GM07G19770 | gma | 07 | pid=16267802;transcript=eq;prot=eq;name=Glyma07g19770.1 | - | Gm07 | No |
| GM20G00900 | gma | 20 | pid=16315098;transcript=eq;prot=eq;name=Glyma20g00900.1 | - | Gm20 | No |
| MD06G000260 | mdo | transcript=eq;prot=eq;pid=MDP0000149339;tid=MDP0000149339;contig=MDC009921.235 | - | 6 | No | |
| ME01012G00040 | mes | PACid=17981350;RNAname=cassava4.1_000685m;GeneName=cassava4.1_000685m.g;transcript=eq;prot=eq | + | scaffold01012 | No | |
| MT1G035010 | mtr | Squamosa promoter binding-like protein (AHRD V1 *-** Q52UU1_9ROSI); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box | transcript=eq;prot=eq;pid=Medtr1g035010.1; | - | 1 | No |
| OS08G40260 | osa | OsSPL15 %2D SBP%2Dbox gene family member, expressed | transcript=eq;prot=eq; | + | 8 | No |
| OSINDICA_08G38760 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC027288; | + | Chr08 | No |
| PT02G00250 | ptr | PACid=17329039;name=POPTR_0002s00440;alias=pt019820m,fgenesh4_pm.C_LG_II000008; | transcript=eq;prot=eq;protein_id=17329039; | - | scaffold_2 | No |
| PT05G26870 | ptr | PACid=17306647;name=POPTR_0005s28010;alias=pt032157m; | transcript=eq;prot=eq;protein_id=17306647; | + | scaffold_5 | No |
| RC30170G07540 | rco | name=30170.m014245;gene=30170.t000657;note=30170.t000657;transcript=eq;prot=eq | + | 30170 | No | |
| SB07G027420 | sbi | 7 | prot=eq;pid=5059084;tid=5059084 | - | chr_7 | No |
| TC08G008260 | tca | RNAname=Tc08_t008260;GeneName=Tc08_g008260;transcript=eq;prot=eq | - | Tc08 | No | |
| VV18G13000 | vvi | name=GSVIVG01013452001; | transcript=eq;prot=eq;name=GSVIVG01013452001;pid=GSVIVG01013452001;tid=GSVIVT01013452001; | - | chr18 | No |