Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007624 has 22 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G05010 aly name=fgenesh2_kg.1__505__AT1G05510.1;pid=470551;prot=eq;tid=470551 + scaffold_1 No
AL4G16990 aly name=fgenesh2_kg.4__1188__AT2G31985.1;pid=482128;prot=eq;tid=482128 - scaffold_4 No
AT1G05510 ath Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.;Protein of unknown function (DUF1264) transcript=eq;prot=eq; + 1 No
AT2G31985 ath Protein of unknown function (DUF1264); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT1G05510.1); Has 289 Blast hits to 289 proteins in 122 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 64; Plants - 102; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;Protein of unknown function (DUF1264) transcript=eq;prot=eq; - 2 No
BD5G10450 bdi pid=Bradi5g10450.1;tid=Bradi5g10450.1;GeneName=Bradi5g10450;transcript=eq;prot=eq - Bd5 No
CP00058G01250 cpa name=evm.TU.supercontig_58.126;pid=evm.TU.supercontig_58.126;prot=eq;transcript=eq + supercontig_58 No
CR03G00910 cre name=e_gwW.27.94.1;pid=119168;prot=eq;tid=119168;transcript=eq + chromosome_3 No
FV3G33290 fve Probable cytosol aminopeptidase (LAP) transcript=eq;prot=eq;pid=gene28594 - LG3 No
GM11G36840 gma 11 pid=16285622;transcript=eq;prot=eq;name=Glyma11g36840.1 - Gm11 No
MD00G093040 mdo transcript=eq;prot=eq;pid=MDP0000271319;tid=MDP0000271319;contig=MDC003976.461 - MDC003976.461 No
MD15G027600 mdo transcript=eq;prot=eq;pid=MDP0000406249;tid=MDP0000406249;contig=MDC018716.332 + 15 No
ME06140G00070 mes PACid=17989909;RNAname=cassava4.1_027529m;GeneName=cassava4.1_027529m.g;transcript=eq;prot=eq - scaffold06140 No
MT3G084870 mtr cDNA clone J24 full insert sequence (AHRD V1 ***- Q6AUN1_ORYSJ); contains Interpro domain(s) IPR010686 Protein of unknown function DUF1264 transcript=eq;prot=eq;pid=Medtr3g084870.1; - 3 No
OS05G49440 osa DUF1264 domain containing protein, putative, expressed transcript=eq;prot=eq; + 5 No
OSINDICA_05G43640 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC022125; + Chr05 No
PP00090G01000 ppa NULL name=fgenesh1_pm.scaffold_90000027,pid=58125,prot=eq,tid=58125 + scaffold_90 No
PT02G23220 ptr PACid=17313481;name=POPTR_0002s23600;alias=pt022387m; transcript=eq;prot=eq;protein_id=17313481; + scaffold_2 No
RC30065G00220 rco name=30065.m001157;gene=30065.t000022;note=30065.t000022;transcript=eq;prot=eq + 30065 No
SB04G031810 sbi 4 prot=eq;pid=5055802;tid=5055802 + chr_4 No
TC04G018240 tca RNAname=Tc04_t018240;GeneName=Tc04_g018240;transcript=eq;prot=eq - Tc04 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier