Sub-family  

Parent family
HOM000020
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO007463 has 23 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G02830 aly name=fgenesh2_kg.8__235__AT5G45650.1;pid=494419;prot=eq;tid=494419 + scaffold_8 No
AL8G02840 aly name=fgenesh2_kg.8__236__AT5G45640.1;pid=494420;prot=eq;tid=494420 + scaffold_8 No
AT5G45640 ath Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilase family protein (TAIR:AT5G45650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Subtilisin-like serine endopeptidase family protein transcript=eq;prot=eq; - 5 No
AT5G45650 ath subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G45640.1); Has 5973 Blast hits to 5550 proteins in 898 species: Archae - 128; Bacteria - 3248; Metazoa - 41; Fungi - 214; Plants - 1924; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink).;subtilase family protein transcript=eq;prot=eq; - 5 No
BD2G48740 bdi serine-type endopeptidase activity (Blast2GO) pid=Bradi2g48740.1;tid=Bradi2g48740.1;GeneName=Bradi2g48740;transcript=eq;prot=eq - Bd2 No
FV0G45200 fve Subtilisin-like protease, Precursor (probable) transcript=eq;prot=eq;pid=gene26756 + scf0513126 No
FV3G08460 fve Subtilisin-like protease, Precursor (probable) transcript=eq;prot=eq;pid=gene24861 + LG3 No
GM13G29470 gma 13 pid=16292004;transcript=eq;prot=eq;name=Glyma13g29470.1 - Gm13 No
LJ6G016280 lja prot=eq;transcript=eq;scaffold=CM0118;name=chr6.CM0118.310.nc - chr6 No
MD05G006210 mdo transcript=eq;prot=eq;pid=MDP0000372632;tid=MDP0000372632;contig=MDC002196.313 + 5 No
MD10G021470 mdo transcript=eq;prot=eq;pid=MDP0000264894;tid=MDP0000264894;contig=MDC000712.193 - 10 No
ME09120G00440 mes PACid=17964046;RNAname=cassava4.1_002037m;GeneName=cassava4.1_002037m.g;transcript=eq;prot=eq - scaffold09120 No
OS01G52750 osa OsSub3 %2D Putative Subtilisin homologue, expressed transcript=eq;prot=eq; - 1 No
OSINDICA_01G49920 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003309; - Chr01 No
PT11G02880 ptr PACid=17319476;name=POPTR_0011s03070;alias=pt013759m,fgenesh4_pg.C_LG_XI000523; transcript=eq;prot=eq;protein_id=17319476; - scaffold_11 No
RC30026G00750 rco name=30026.m001511;gene=30026.t000075;note=30026.t000075;transcript=eq;prot=eq + 30026 No
SB03G033440 sbi 3 prot=eq;pid=5036575;tid=5036575 - chr_3 No
SM00004G06060 smo proteinId=81842;transcriptId=81842;name=e_gw1.4.211.1;transcript=eq;prot=eq + scaffold_4 No
SM00006G06810 smo proteinId=407350;transcriptId=407350;name=fgenesh2_pg.C_scaffold_6000601;transcript=eq;prot=eq + scaffold_6 No
TC06G013520 tca RNAname=Tc06_t013520;GeneName=Tc06_g013520;transcript=eq;prot=eq - Tc06 No
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