Sub-family  

Parent family
HOM000151
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (5 genes)
ptr
Populus trichocarpa (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO007356 has 23 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G26160 aly name=fgenesh1_pg.C_scaffold_6002201;pid=351608;prot=eq;tid=351608 - scaffold_6 No
AL6G26170 aly name=fgenesh1_pg.C_scaffold_6002202;pid=351609;prot=eq;tid=351609 - scaffold_6 No
AT5G25950 ath Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT5G25960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; - 5 No
CP00060G00630 cpa name=evm.TU.supercontig_60.63;pid=evm.TU.supercontig_60.63;prot=eq;transcript=eq - supercontig_60 No
FV2G32400 fve Photosystem II CP43 chlorophyll apoprotein, Precursor (probable) transcript=eq;prot=eq;pid=gene02657 - LG2 No
FV2G32410 fve Toll-like receptor 1 (TIL), Precursor (probable) transcript=eq;prot=eq;pid=gene02658 - LG2 No
GM06G05310 gma 06 pid=16261801;transcript=eq;prot=eq;name=Glyma06g05310.1 - Gm06 No
GM17G34970 gma 17 pid=16307089;transcript=eq;prot=eq;name=Glyma17g34970.1 + Gm17 No
LJ5G014150 lja prot=eq;transcript=eq;scaffold=CM0024;name=chr5.CM0024.640.nc - chr5 No
MD00G377680 mdo transcript=eq;prot=eq;pid=MDP0000129640;tid=MDP0000129640;contig=MDC017110.184 + MDC017110.184 No
MD08G009220 mdo transcript=eq;prot=eq;pid=MDP0000241751;tid=MDP0000241751;contig=MDC012891.303 + 8 No
MD15G001250 mdo transcript=eq;prot=eq;pid=MDP0000241749;tid=MDP0000241749;contig=MDC012891.283 + 15 No
ME05806G00250 mes PACid=17989888;RNAname=cassava4.1_023039m;GeneName=cassava4.1_023039m.g;transcript=eq;prot=eq - scaffold05806 No
ME12118G00300 mes PACid=17983102;RNAname=cassava4.1_028053m;GeneName=cassava4.1_028053m.g;transcript=eq;prot=eq + scaffold12118 No
MT3G103980 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004314 Protein of unknown function DUF239, plant transcript=eq;prot=eq;pid=Medtr3g103980.1; - 3 No
MT3G104000 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004314 Protein of unknown function DUF239, plant transcript=eq;prot=eq;pid=Medtr3g104000.1; - 3 No
MT3G104030 mtr Carboxyl-terminal proteinase (AHRD V1 ***- B4FXN3_MAIZE); contains Interpro domain(s) IPR004314 Protein of unknown function DUF239, plant transcript=eq;prot=eq;pid=Medtr3g104030.1; - 3 No
MT3G104070 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004314 Protein of unknown function DUF239, plant transcript=eq;prot=eq;pid=Medtr3g104070.1; - 3 No
MT6G012620 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004314 Protein of unknown function DUF239, plant transcript=eq;prot=eq;pid=Medtr6g012620.1; + 6 No
PT06G23280 ptr PACid=17341398;name=POPTR_0006s24990;alias=pt017828m; transcript=eq;prot=eq;protein_id=17341398; + scaffold_6 No
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