Sub-family  

Parent family
HOM000151
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007337 has 23 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G18500 aly name=fgenesh2_kg.6__1859__AT5G18460.1;pid=488725;prot=eq;tid=488725 + scaffold_6 No
AT5G18460 ath Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Protein of Unknown Function (DUF239) transcript=eq;prot=eq; + 5 No
BD3G12750 bdi pid=Bradi3g12750.1;tid=Bradi3g12750.1;GeneName=Bradi3g12750;transcript=eq;prot=eq - Bd3 No
CP00051G00200 cpa name=evm.TU.supercontig_51.20;pid=evm.TU.supercontig_51.20;prot=eq;transcript=eq - supercontig_51 No
FV0G27020 fve Aspartic proteinase sxa1, Precursor (probable) transcript=eq;prot=eq;pid=gene16706 - scf0513168 No
GM03G41280 gma 03 pid=16254120;transcript=eq;prot=eq;name=Glyma03g41280.1 - Gm03 No
GM10G31140 gma 10 pid=16280541;transcript=eq;prot=eq;name=Glyma10g31140.1 - Gm10 No
GM19G43900 gma 19 pid=16314851;transcript=eq;prot=eq;name=Glyma19g43900.1 - Gm19 No
GM20G36380 gma 20 pid=16318060;transcript=eq;prot=eq;name=Glyma20g36380.1 + Gm20 No
LJ1G056180 lja prot=eq;transcript=eq;scaffold=LjT14G19;name=chr1.LjT14G19.100.nc - chr1 No
MD00G370170 mdo transcript=eq;prot=eq;pid=MDP0000206198;tid=MDP0000206198;contig=MDC016735.113 - MDC016735.113 No
ME02903G00100 mes PACid=17982052;RNAname=cassava4.1_007770m;GeneName=cassava4.1_007770m.g;transcript=ne;prot=eq - scaffold02903 No
ME03614G02770 mes PACid=17966088;RNAname=cassava4.1_007975m;GeneName=cassava4.1_007975m.g;transcript=eq;prot=eq + scaffold03614 No
MT1G079730 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004314 Protein of unknown function DUF239, plant transcript=eq;prot=eq;pid=Medtr1g079730.1; + 1 No
MT7G116420 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004314 Protein of unknown function DUF239, plant transcript=eq;prot=eq;pid=Medtr7g116420.1; - 7 No
OSINDICA_08G44070 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC027654; - Chr08 No
PT13G04580 ptr PACid=17333771;name=POPTR_0013s04770;alias=pt030721m,gw1.XIII.1778.1; transcript=eq;prot=eq;protein_id=17333771; - scaffold_13 No
PT19G03890 ptr PACid=17325134;name=POPTR_0019s04080;alias=pt009965m; transcript=eq;prot=eq;protein_id=17325134; - scaffold_19 No
RC29680G00730 rco name=29680.m001734;gene=29680.t000077;note=29680.t000077;transcript=eq;prot=eq - 29680 No
SB07G023510 sbi 7 prot=eq;pid=5058871;tid=5058871 + chr_7 No
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