Sub-family  

Parent family
HOM001235
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO007334 has 23 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G17720 aly name=Al_scaffold_0006_1692;pid=862183;prot=eq;tid=893696 - scaffold_6 No
AT5G17790 ath Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.;zinc finger (Ran-binding) family protein transcript=eq;prot=eq; - 5 No
BD2G53210 bdi zinc ion binding (Blast2GO) pid=Bradi2g53210.1;tid=Bradi2g53210.1;GeneName=Bradi2g53210;transcript=eq;prot=eq + Bd2 No
CP00073G00050 cpa name=evm.TU.supercontig_73.5;pid=evm.TU.supercontig_73.5;prot=eq;transcript=eq + supercontig_73 No
FV6G38430 fve Zinc finger protein VAR3, chloroplastic, Precursor (probable) transcript=eq;prot=eq;pid=gene26367 + LG6 No
GM03G00950 gma 03 pid=16250714;transcript=eq;prot=eq;name=Glyma03g00950.1 - Gm03 No
GM19G29710 gma 19 pid=16313216;transcript=eq;prot=eq;name=Glyma19g29710.1 + Gm19 No
LJ0G416120 lja partial;prot=eq;transcript=eq;scaffold=LjT26C04;name=LjT26C04.50.nd - chr0 No
MD00G442690 mdo transcript=eq;prot=eq;pid=MDP0000688583;tid=MDP0000688583;contig=MDC020298.290 - MDC020298.290 No
MD00G442710 mdo transcript=eq;prot=eq;pid=MDP0000224484;tid=MDP0000224484;contig=MDC020298.291 + MDC020298.291 No
MD12G001340 mdo transcript=eq;prot=eq;pid=MDP0000269771;tid=MDP0000269771;contig=MDC002037.232 + 12 No
MD14G000730 mdo transcript=eq;prot=eq;pid=MDP0000131637;tid=MDP0000131637;contig=MDC020298.287 + 14 No
ME02431G00040 mes PACid=17975215;RNAname=cassava4.1_001208m;GeneName=cassava4.1_001208m.g;transcript=eq;prot=eq - scaffold02431 No
MT7G087050 mtr Zinc finger protein VAR3, chloroplastic (AHRD V1 *-*- Q8S9K3); contains Interpro domain(s) IPR001876 Zinc finger, RanBP2-type transcript=eq;prot=eq;pid=Medtr7g087050.1; + 7 No
OS01G59980 osa zinc finger family protein, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G56830 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003816; + Chr01 No
PT13G06160 ptr PACid=17325707;name=POPTR_0013s06350;alias=pt030462m; transcript=eq;prot=eq;protein_id=17325707; + scaffold_13 No
RC29818G00010 rco name=29818.m000389;gene=29818.t000001;note=29818.t000001;transcript=eq;prot=eq + 29818 No
SB03G037900 sbi 3 prot=eq;pid=5053905;tid=5053905 + chr_3 No
TC00G020230 tca RNAname=Tc00_t020230;GeneName=Tc00_g020230;transcript=eq;prot=eq + Tc00 No
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