Sub-family  

Parent family
HOM000179
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO007258 has 23 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G10400 aly name=fgenesh2_kg.5__752__AT3G33520.1;pid=484760;prot=eq;tid=484760 - scaffold_5 No
AT3G33520 ath Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature.;actin-related protein 6 transcript=eq;prot=eq; - 3 No
BD2G10130 bdi Homologous to Arabidopsis ACTIN-RELATED PROTEIN 6 pid=Bradi2g10130.2;tid=Bradi2g10130.2;GeneName=Bradi2g10130;Name=BdARP6;transcript=eq;prot=eq - Bd2 No
CP00046G00240 cpa name=evm.TU.supercontig_46.24;pid=evm.TU.supercontig_46.24;prot=eq;transcript=eq - supercontig_46 No
FV1G05080 fve Actin-related protein 6 (putative) transcript=eq;prot=eq;pid=gene31086 + LG1 No
GM04G07540 gma 04 pid=16255202;transcript=eq;prot=eq;name=Glyma04g07540.1 - Gm04 No
MD00G150400 mdo transcript=eq;prot=eq;pid=MDP0000279104;tid=MDP0000279104;contig=MDC006464.260 + MDC006464.260 No
MD02G002800 mdo transcript=eq;prot=eq;pid=MDP0000266288;tid=MDP0000266288;contig=MDC002407.855 + 2 No
ME05884G00140 mes PACid=17970670;RNAname=cassava4.1_008003m;GeneName=cassava4.1_008003m.g;transcript=eq;prot=eq - scaffold05884 No
MRCC299_06G04290 mrcc299 name=e_gw2.06.283.1;pid=82770;prot=eq;tid=82770;transcript=eq + Chr_06 No
MRCC299_06G04300 mrcc299 name=fgenesh2_kg.C_Chr_06000060;pid=96445;prot=eq;tid=96445;transcript=eq + Chr_06 No
OL08G01220 olu NULL name=e_gwEuk.8.219.1,prot=none + Chr_8 No
OS01G16414 osa actin, putative, expressed transcript=eq;prot=eq; - 1 No
OSINDICA_01G16020 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC001133; - Chr01 No
OT08G01320 ota putative actin-related protein 6 (ISS); name=OT08G01320;protein_id=CAL54871.1;prot=eq;partial=yes + chrom08 No
PP00062G00470 ppa NULL name=e_gw1.62.31.1,pid=126969,prot=eq,tid=126969 - scaffold_62 No
PT18G11890 ptr PACid=17340374;name=POPTR_0018s12840;alias=pt008608m; transcript=eq;prot=eq;protein_id=17340374; + scaffold_18 No
RC29927G00190 rco name=29927.m000609;gene=29927.t000019;note=29927.t000019;transcript=eq;prot=eq + 29927 No
SB08G021780 sbi 8 prot=eq;pid=5059831;tid=5059831 + chr_8 No
TC09G011710 tca RNAname=Tc09_t011710;GeneName=Tc09_g011710;transcript=eq;prot=eq - Tc09 No
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