Sub-family  

Parent family
HOM000818
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family ORTHO007038 has 23 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G17480 aly name=fgenesh2_kg.2__1179__AT1G69230.1;pid=476049;prot=eq;tid=476049 - scaffold_2 No
AT1G69230 ath SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion.;SPIRAL1-like2 transcript=eq;prot=eq; - 1 No
BD0G00220 bdi pid=Bradi0018s00200.4;tid=Bradi0018s00200.4;GeneName=Bradi0018s00200;transcript=eq;prot=eq + scaffold_18 No
BD1G22100 bdi pid=Bradi1g22100.2;tid=Bradi1g22100.2;GeneName=Bradi1g22100;transcript=eq;prot=eq - Bd1 No
CP00014G01970 cpa name=evm.TU.supercontig_14.197;pid=evm.TU.supercontig_14.197;prot=eq;transcript=eq + supercontig_14 No
FV5G11890 fve Outer membrane protein icsA translocator, Precursor (probable) transcript=eq;prot=eq;pid=gene26104 - LG5 No
MD00G366770 mdo transcript=eq;prot=eq;pid=MDP0000243217;tid=MDP0000243217;contig=MDC016553.87 + MDC016553.87 No
MD06G016780 mdo transcript=eq;prot=eq;pid=MDP0000236634;tid=MDP0000236634;contig=MDC002966.251 + 6 No
MD14G020230 mdo transcript=eq;prot=eq;pid=MDP0000380269;tid=MDP0000380269;contig=MDC003840.308 + 14 No
ME06656G00990 mes PACid=17962753;RNAname=cassava4.1_019586m;GeneName=cassava4.1_019586m.g;transcript=eq;prot=eq - scaffold06656 No
ME08359G01530 mes PACid=17969089;RNAname=cassava4.1_019590m;GeneName=cassava4.1_019590m.g;transcript=eq;prot=eq - scaffold08359 No
OS11G41150 osa nitrilase%2Dassociated protein, putative, expressed transcript=eq;prot=eq; - 11 No
OS12G31780 osa nitrilase%2Dassociated protein, putative, expressed transcript=eq;prot=eq; - 12 No
OSINDICA_12G21220 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC033134; - Chr12 No
PP00109G00630 ppa NULL name=fgenesh2_pg.scaffold_109000075,pid=230662,prot=eq,tid=230662 + scaffold_109 No
PT15G06060 ptr PACid=17343261;name=POPTR_0015s07010;alias=pt001272m; transcript=eq;prot=eq;protein_id=17343261; + scaffold_15 No
RC30138G01240 rco name=30138.m003955;gene=30138.t000129;note=30138.t000129;transcript=eq;prot=eq - 30138 No
SB05G025170 sbi 5 prot=eq;pid=5056779;tid=5056779 - chr_5 No
TC03G012400 tca RNAname=Tc03_t012400;GeneName=Tc03_g012400;transcript=eq;prot=eq + Tc03 No
VV14G12980 vvi name=GSVIVG01032901001; transcript=eq;prot=eq;name=GSVIVG01032901001;pid=GSVIVG01032901001;tid=GSVIVT01032901001; - chr14 No
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